WormBase Tree Display for Gene: WBGene00019842

WBGene00019842 SMap: S_parent: Sequence: R02F11
  Identity: Version: 2
    Name: CGC_name: ccep-97 Paper_evidence: WBPaper00062523
      Sequence_name: R02F11.4
      Molecular_name: R02F11.4
        R02F11.4.1
        CE12502
      Other_name: CELE_R02F11.4 Accession_evidence: NDB BX284605
      Public_name: ccep-97
    DB_info: Database: AceView gene 5F290
        WormQTL gene WBGene00019842
        WormFlux gene WBGene00019842
        NDB locus_tag CELE_R02F11.4
        Panther gene CAEEL|WormBase=WBGene00019842|UniProtKB=O16366
          family PTHR15454
        NCBI gene 178871
        RefSeq protein NM_071888.5
        TREEFAM TREEFAM_ID TF320816
        TrEMBL UniProtAcc O16366
        UniProt_GCRP UniProtAcc O16366
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Mar 2022 23:57:00 WBPerson51134 Name_change: CGC_name: ccep-97
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ccep
    Allele (170)
    RNASeq_FPKM (74)
    GO_annotation: 00029069
      00029070
      00029071
      00029072
      00029073
      00029074
      00029075
      00029076
      00029077
    Contained_in_operon: CEOP5064
    Ortholog (32)
    Paralog: WBGene00008750 Caenorhabditis elegans From_analysis: Panther
      WBGene00011637 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015516 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020266 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00189952 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable alpha-tubulin binding activity and dynein heavy chain binding activity. Predicted to be involved in outer dynein arm assembly. Predicted to be located in cytoplasm. Predicted to be part of dynein complex. Is an ortholog of human CEP97 (centrosomal protein 97). Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: R02F11.4
    Corresponding_transcript: R02F11.4.1
    Other_sequence (18)
    Associated_feature: WBsf652588
      WBsf668916
      WBsf999883
      WBsf1019557
      WBsf233608
      WBsf233609
  Experimental_info: RNAi_result: WBRNAi00093034 Inferred_automatically: RNAi_primary
      WBRNAi00017332 Inferred_automatically: RNAi_primary
      WBRNAi00076590 Inferred_automatically: RNAi_primary
      WBRNAi00051147 Inferred_automatically: RNAi_primary
      WBRNAi00002114 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017838
      Expr1038605
      Expr1154859
      Expr2005335
      Expr2023554
    Microarray_results (17)
    Expression_cluster (117)
    Interaction (23)
  Map_info: Map: V Position: -4.17946
    Positive: Positive_clone: R02F11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00063966
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene