WormBase Tree Display for Gene: WBGene00019289
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| WBGene00019289 | SMap | S_parent | Sequence | K02A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | kcc-3 | Person_evidence | WBPerson2369 | |||||
| WBPerson330 | |||||||||
| Sequence_name | K02A2.3 | ||||||||
| Molecular_name | K02A2.3a | ||||||||
| K02A2.3a.1 | |||||||||
| CE52024 | |||||||||
| K02A2.3b | |||||||||
| CE51971 | |||||||||
| K02A2.3b.1 | |||||||||
| Other_name | CELE_K02A2.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | kcc-3 | ||||||||
| DB_info | Database | AceView | gene | 2H716 | |||||
| WormQTL | gene | WBGene00019289 | |||||||
| WormFlux | gene | WBGene00019289 | |||||||
| NDB | locus_tag | CELE_K02A2.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019289|UniProtKB=Q09573 | |||||||
| family | PTHR11827 | ||||||||
| NCBI | gene | 174212 | |||||||
| RefSeq | protein | NM_001351919.3 | |||||||
| NM_001351920.4 | |||||||||
| SwissProt | UniProtAcc | Q09573 | |||||||
| TrEMBL | UniProtAcc | A0A1X7RC59 | |||||||
| UniProt_GCRP | UniProtAcc | Q09573 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Feb 2006 09:28:57 | WBPerson2970 | Name_change | CGC_name | kcc-2 | ||||
| 3 | 07 Jan 2008 15:16:07 | WBPerson2970 | Name_change | CGC_name | kcc-2 to kcc-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | kcc | ||||||||
| Allele (111) | |||||||||
| Strain | WBStrain00031426 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (24) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00006504 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012543 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015131 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017350 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019205 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020207 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable potassium:chloride symporter activity. Involved in microvillus organization. Located in apical plasma membrane. Expressed in amphid sheath cell; head; phasmid sheath cell; and tail. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02A2.3a | |||||||
| K02A2.3b | |||||||||
| Corresponding_CDS_history | K02A2.3:wp187 | ||||||||
| K02A2.3:wp259 | |||||||||
| Corresponding_transcript | K02A2.3a.1 | ||||||||
| K02A2.3b.1 | |||||||||
| Other_sequence (25) | |||||||||
| Associated_feature | WBsf665686 | ||||||||
| WBsf665687 | |||||||||
| WBsf988443 | |||||||||
| WBsf988444 | |||||||||
| WBsf988445 | |||||||||
| WBsf1012530 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001010 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103427 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113764 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016420 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8771 | ||||||||
| Expr12497 | |||||||||
| Expr12918 | |||||||||
| Expr12919 | |||||||||
| Expr1027922 | |||||||||
| Expr1038336 | |||||||||
| Expr1153378 | |||||||||
| Expr2012912 | |||||||||
| Expr2031146 | |||||||||
| Drives_construct | WBCnstr00013510 | ||||||||
| WBCnstr00023093 | |||||||||
| Construct_product | WBCnstr00021143 | ||||||||
| WBCnstr00021144 | |||||||||
| WBCnstr00021145 | |||||||||
| WBCnstr00021146 | |||||||||
| WBCnstr00023093 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | II | Position | 0.503003 | Error | 1.3e-05 | |||
| Positive | Positive_clone | K02A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (10) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
