WormBase Tree Display for Gene: WBGene00019289
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WBGene00019289 | SMap | S_parent | Sequence | K02A2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | kcc-3 | Person_evidence | WBPerson2369 | |||||
WBPerson330 | |||||||||
Sequence_name | K02A2.3 | ||||||||
Molecular_name | K02A2.3a | ||||||||
K02A2.3a.1 | |||||||||
CE52024 | |||||||||
K02A2.3b | |||||||||
CE51971 | |||||||||
K02A2.3b.1 | |||||||||
Other_name | CELE_K02A2.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | kcc-3 | ||||||||
DB_info | Database | AceView | gene | 2H716 | |||||
WormQTL | gene | WBGene00019289 | |||||||
WormFlux | gene | WBGene00019289 | |||||||
NDB | locus_tag | CELE_K02A2.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019289|UniProtKB=Q09573 | |||||||
family | PTHR11827 | ||||||||
NCBI | gene | 174212 | |||||||
RefSeq | protein | NM_001351919.3 | |||||||
NM_001351920.4 | |||||||||
SwissProt | UniProtAcc | Q09573 | |||||||
TrEMBL | UniProtAcc | A0A1X7RC59 | |||||||
UniProt_GCRP | UniProtAcc | Q09573 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 02 Feb 2006 09:28:57 | WBPerson2970 | Name_change | CGC_name | kcc-2 | ||||
3 | 07 Jan 2008 15:16:07 | WBPerson2970 | Name_change | CGC_name | kcc-2 to kcc-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | kcc | ||||||||
Allele (111) | |||||||||
Strain | WBStrain00031426 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (24) | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00006504 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012543 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00015131 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00017350 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00019205 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020207 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable potassium:chloride symporter activity. Involved in microvillus organization. Located in apical plasma membrane. Expressed in amphid sheath cell; head; phasmid sheath cell; and tail. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K02A2.3a | |||||||
K02A2.3b | |||||||||
Corresponding_CDS_history | K02A2.3:wp187 | ||||||||
K02A2.3:wp259 | |||||||||
Corresponding_transcript | K02A2.3a.1 | ||||||||
K02A2.3b.1 | |||||||||
Other_sequence (25) | |||||||||
Associated_feature | WBsf665686 | ||||||||
WBsf665687 | |||||||||
WBsf988443 | |||||||||
WBsf988444 | |||||||||
WBsf988445 | |||||||||
WBsf1012530 | |||||||||
Experimental_info | RNAi_result | WBRNAi00001010 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103427 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049650 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113764 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016420 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr8771 | ||||||||
Expr12497 | |||||||||
Expr12918 | |||||||||
Expr12919 | |||||||||
Expr1027922 | |||||||||
Expr1038336 | |||||||||
Expr1153378 | |||||||||
Expr2012912 | |||||||||
Expr2031146 | |||||||||
Drives_construct | WBCnstr00013510 | ||||||||
WBCnstr00023093 | |||||||||
Construct_product | WBCnstr00021143 | ||||||||
WBCnstr00021144 | |||||||||
WBCnstr00021145 | |||||||||
WBCnstr00021146 | |||||||||
WBCnstr00023093 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (111) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | II | Position | 0.503003 | Error | 1.3e-05 | |||
Positive | Positive_clone | K02A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035082 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00048088 | |||||||||
WBPaper00048669 | |||||||||
WBPaper00049423 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00058440 | |||||||||
WBPaper00063740 | |||||||||
WBPaper00064809 | |||||||||
WBPaper00066549 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |