WormBase Tree Display for Gene: WBGene00018975
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| WBGene00018975 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | picd-1 | Person_evidence | WBPerson225 | |||||
| Sequence_name | F56E10.1 | ||||||||
| Molecular_name | F56E10.1a | ||||||||
| F56E10.1a.1 | |||||||||
| CE50598 | |||||||||
| F56E10.1b | |||||||||
| CE50602 | |||||||||
| F56E10.1b.1 | |||||||||
| Other_name | CELE_F56E10.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | picd-1 | ||||||||
| DB_info | Database | AceView | gene | 5A583 | |||||
| WormQTL | gene | WBGene00018975 | |||||||
| WormFlux | gene | WBGene00018975 | |||||||
| NDB | locus_tag | CELE_F56E10.1 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00018975|UniProtKB=A0A0K3AUI7 | |||||||
| family | PTHR15502 | ||||||||
| NCBI | gene | 186391 | |||||||
| RefSeq | protein | NM_001313067.4 | |||||||
| NM_001313066.2 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AUI7 | |||||||
| A0A0K3AS47 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AUI7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Mar 2015 14:30:37 | WBPerson4025 | Event | Acquires_merge | WBGene00021411 | ||||
| 3 | 08 Jul 2021 09:45:01 | WBPerson1983 | Name_change | CGC_name | picd-1 | ||||
| Acquires_merge | WBGene00021411 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | picd | ||||||||
| Allele (280) | |||||||||
| Strain | WBStrain00047536 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000973 | ||||||||
| 00000974 | |||||||||
| 00000975 | |||||||||
| 00000976 | |||||||||
| 00127865 | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00004031 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to contribute to nucleosome binding activity. Predicted to be involved in chromatin organization. Predicted to be located in nucleus. Expressed in several structures, including body wall musculature; head neurons; intestine; pharynx; and vulva. Human ortholog(s) of this gene implicated in ovarian carcinoma. Is an ortholog of human CABIN1 (calcineurin binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4001 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24187) | ||||
| Molecular_info | Corresponding_CDS | F56E10.1a | |||||||
| F56E10.1b | |||||||||
| Corresponding_CDS_history | F56E10.1:wp247 | ||||||||
| Corresponding_transcript | F56E10.1a.1 | ||||||||
| F56E10.1b.1 | |||||||||
| Other_sequence | MH04834 | ||||||||
| CBC13790_1 | |||||||||
| MH02191 | |||||||||
| Dviv_isotig22926 | |||||||||
| Associated_feature | WBsf646622 | ||||||||
| WBsf661086 | |||||||||
| WBsf661087 | |||||||||
| WBsf661088 | |||||||||
| WBsf999078 | |||||||||
| WBsf999079 | |||||||||
| WBsf1019018 | |||||||||
| WBsf1019019 | |||||||||
| WBsf231303 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048725 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015833 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056004 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062278 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062424 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082916 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036836 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032964 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020267 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr16219 | ||||||||
| Expr1014942 | |||||||||
| Expr1022299 | |||||||||
| Expr1038191 | |||||||||
| Expr1039352 | |||||||||
| Expr1152480 | |||||||||
| Expr1159522 | |||||||||
| Expr2004303 | |||||||||
| Expr2022527 | |||||||||
| Drives_construct | WBCnstr00042830 | ||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (47) | |||||||||
| Map_info | Map | V | Position | -20.0122 | |||||
| Positive | Positive_clone | F56E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027683 | ||||||||
| WBPaper00035598 | |||||||||
| WBPaper00064284 | |||||||||
| WBPaper00064287 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
