WormBase Tree Display for Gene: WBGene00018946
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WBGene00018946 | SMap | S_parent | Sequence | F56C3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F56C3.9 | |||||||
Molecular_name | F56C3.9 | ||||||||
F56C3.9.1 | |||||||||
CE17900 | |||||||||
Other_name | CELE_F56C3.9 | Accession_evidence | NDB | BX284606 | |||||
Public_name | F56C3.9 | ||||||||
DB_info | Database | AceView | gene | XC8 | |||||
WormQTL | gene | WBGene00018946 | |||||||
WormFlux | gene | WBGene00018946 | |||||||
NDB | locus_tag | CELE_F56C3.9 | |||||||
NCBI | gene | 186367 | |||||||
RefSeq | protein | NM_075857.8 | |||||||
TREEFAM | TREEFAM_ID | TF317616 | |||||||
TrEMBL | UniProtAcc | O61761 | |||||||
UniProt_GCRP | UniProtAcc | O61761 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (37) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (17) | |||||||||
Paralog | WBGene00009820 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00007778 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00015567 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018137 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in anchor cell based on RNA-seq studies. Is affected by several genes including fzo-1; cyc-1; and nuo-6 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty-four chemicals including hydrogen sulfide; Mercuric Chloride; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: BTB/POZ domain and SKP1/BTB/POZ domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56C3.9 | |||||||
Corresponding_transcript | F56C3.9.1 | ||||||||
Other_sequence | Tcir_isotig14786 | ||||||||
Tcir_isotig13225 | |||||||||
Associated_feature | WBsf716845 | ||||||||
WBsf237014 | |||||||||
Experimental_info | RNAi_result | WBRNAi00070093 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048664 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015796 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032942 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023242 | ||||||||
Expr1152426 | |||||||||
Expr2004280 | |||||||||
Expr2022504 | |||||||||
Drives_construct | WBCnstr00026173 | ||||||||
Construct_product | WBCnstr00026173 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (206) | |||||||||
Interaction | WBInteraction000258882 | ||||||||
WBInteraction000374506 | |||||||||
WBInteraction000387320 | |||||||||
WBInteraction000406196 | |||||||||
WBInteraction000544275 | |||||||||
WBInteraction000545952 | |||||||||
WBInteraction000560252 | |||||||||
Map_info | Positive | Positive_clone | F56C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -18.1796 | |||||||
Method | Gene |