WormBase Tree Display for Gene: WBGene00018645
expand all nodes | collapse all nodes | view schema
WBGene00018645 | SMap | S_parent | Sequence | F49F1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F49F1.5 | |||||||
Molecular_name | F49F1.5a | ||||||||
F49F1.5a.1 | |||||||||
CE17088 | |||||||||
F49F1.5b | |||||||||
CE48537 | |||||||||
F49F1.5b.1 | |||||||||
Other_name | CELE_F49F1.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F49F1.5 | ||||||||
DB_info | Database | AceView | gene | 4E884 | |||||
WormQTL | gene | WBGene00018645 | |||||||
WormFlux | gene | WBGene00018645 | |||||||
NDB | locus_tag | CELE_F49F1.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018645|UniProtKB=Q9GZE4 | |||||||
family | PTHR21724 | ||||||||
NCBI | gene | 186062 | |||||||
RefSeq | protein | NM_001307492.2 | |||||||
NM_068085.7 | |||||||||
TrEMBL | UniProtAcc | U4PRI6 | |||||||
Q9GZE4 | |||||||||
UniProt_GCRP | UniProtAcc | Q9GZE4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (17) | |||||||||
Paralog (35) | |||||||||
Structured_description | Automated_description | Enriched in OLL; PVD; head mesodermal cell; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including cyc-1; hyl-2; and swsn-2.2 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-three chemicals including Heme; hydrogen sulfide; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F49F1.5a | |||||||
F49F1.5b | |||||||||
Corresponding_transcript | F49F1.5a.1 | ||||||||
F49F1.5b.1 | |||||||||
Associated_feature | WBsf229945 | ||||||||
Experimental_info | RNAi_result | WBRNAi00047880 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00087733 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032559 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015344 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103374 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023027 | ||||||||
Expr1151711 | |||||||||
Expr2003954 | |||||||||
Expr2022176 | |||||||||
Drives_construct | WBCnstr00026362 | ||||||||
Construct_product | WBCnstr00026362 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (276) | |||||||||
Interaction | WBInteraction000351265 | ||||||||
WBInteraction000419064 | |||||||||
Map_info | Positive | Positive_clone | F49F1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | -0.673562 | |||||||
Reference | WBPaper00031805 | ||||||||
WBPaper00058665 | |||||||||
Method | Gene |