WormBase Tree Display for Gene: WBGene00018395
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WBGene00018395 | SMap | S_parent | Sequence | F43E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mtch-1 | Person_evidence | WBPerson261 | |||||
Sequence_name | F43E2.7 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_F43E2.7 | Accession_evidence | NDB | BX284602 | |||||
Public_name | mtch-1 | ||||||||
DB_info | Database | AceView | gene | 2H664 | |||||
WormQTL | gene | WBGene00018395 | |||||||
WormFlux | gene | WBGene00018395 | |||||||
NDB | locus_tag | CELE_F43E2.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018395|UniProtKB=H2KYJ5 | |||||||
family | PTHR10780 | ||||||||
NCBI | gene | 174207 | |||||||
RefSeq | protein | NM_001377817.2 | |||||||
TrEMBL | UniProtAcc | H2KYJ5 | |||||||
UniProt_GCRP | UniProtAcc | H2KYJ5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 31 Aug 2011 09:11:34 | WBPerson2970 | Name_change | CGC_name | mtch-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mtch | ||||||||
Allele (28) | |||||||||
Strain | WBStrain00003485 | ||||||||
WBStrain00036531 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00020575 | ||||||||
00020576 | |||||||||
00020577 | |||||||||
00020578 | |||||||||
Ortholog (38) | |||||||||
Paralog | WBGene00018397 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Predicted to be located in membrane and mitochondrion. Is an ortholog of human MTCH1 (mitochondrial carrier 1) and MTCH2 (mitochondrial carrier 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F43E2.7 | |||||||
Corresponding_CDS_history | F43E2.7a:wp92 | ||||||||
F43E2.7a:wp183 | |||||||||
F43E2.7a:wp274 | |||||||||
F43E2.7b:wp90 | |||||||||
F43E2.7b:wp274 | |||||||||
Corresponding_transcript | F43E2.7.1 | ||||||||
Other_sequence (57) | |||||||||
Associated_feature | WBsf650228 | ||||||||
WBsf650229 | |||||||||
WBsf976476 | |||||||||
WBsf223332 | |||||||||
WBsf223333 | |||||||||
WBsf223334 | |||||||||
WBsf223335 | |||||||||
WBsf223336 | |||||||||
WBsf223337 | |||||||||
Experimental_info | RNAi_result (16) | ||||||||
Expr_pattern | Chronogram429 | ||||||||
Expr6060 | |||||||||
Expr13256 | |||||||||
Expr1016551 | |||||||||
Expr1037923 | |||||||||
Expr1151062 | |||||||||
Expr2013799 | |||||||||
Expr2032039 | |||||||||
Drives_construct | WBCnstr00003943 | ||||||||
WBCnstr00026554 | |||||||||
Construct_product | WBCnstr00026554 | ||||||||
Microarray_results (29) | |||||||||
Expression_cluster (122) | |||||||||
Interaction (25) | |||||||||
Map_info | Map | II | Position | 0.502806 | Error | 1.1e-05 | |||
Positive | Positive_clone | F43E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00029254 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00048493 | |||||||||
WBPaper00051783 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
WBPaper00064733 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |