WormBase Tree Display for Gene: WBGene00017912
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WBGene00017912 | SMap | S_parent | Sequence | F29A7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxb-107 | Person_evidence | WBPerson655 | |||||
Sequence_name | F29A7.2 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_F29A7.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | fbxb-107 | ||||||||
DB_info | Database | AceView | gene | 2D51 | |||||
WormQTL | gene | WBGene00017912 | |||||||
WormFlux | gene | WBGene00017912 | |||||||
NDB | locus_tag | CELE_F29A7.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017912|UniProtKB=O16211 | |||||||
family | PTHR22899 | ||||||||
NCBI | gene | 173619 | |||||||
RefSeq | protein | NM_001377734.2 | |||||||
TREEFAM | TREEFAM_ID | TF322269 | |||||||
TrEMBL | UniProtAcc | O16211 | |||||||
UniProt_GCRP | UniProtAcc | O16211 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-107 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxb | ||||||||
Allele (83) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (24) | |||||||||
Paralog (143) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaappppa; ABalapaappa; ABalapappaa; RICL; and amphid neurons based on single-cell RNA-seq studies. Is affected by several genes including cyc-1; srbc-48; and mrps-5 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; mianserin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated; F-box associated domain, type 2; and F-box domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F29A7.2 | |||||||
Corresponding_CDS_history | F29A7.2:wp125 | ||||||||
F29A7.2:wp274 | |||||||||
Corresponding_transcript | F29A7.2.1 | ||||||||
Associated_feature | WBsf657155 | ||||||||
WBsf987047 | |||||||||
WBsf220951 | |||||||||
Experimental_info | RNAi_result | WBRNAi00045888 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000662 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022343 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011113 | ||||||||
Expr1037700 | |||||||||
Expr1149792 | |||||||||
Expr2011602 | |||||||||
Expr2029841 | |||||||||
Drives_construct | WBCnstr00026923 | ||||||||
Construct_product | WBCnstr00026923 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (103) | |||||||||
Interaction (76) | |||||||||
Map_info | Map | II | Position | -11.7541 | Error | 0.012923 | |||
Positive | Positive_clone | F29A7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064898 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |