WormBase Tree Display for Gene: WBGene00017881
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WBGene00017881 | SMap | S_parent | Sequence | F28A12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | asp-13 | Person_evidence | WBPerson261 | |||||
Sequence_name | F28A12.4 | ||||||||
Molecular_name | F28A12.4 | ||||||||
F28A12.4.1 | |||||||||
CE09738 | |||||||||
Other_name | CELE_F28A12.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | asp-13 | ||||||||
DB_info | Database | AceView | gene | 5J122 | |||||
WormQTL | gene | WBGene00017881 | |||||||
WormFlux | gene | WBGene00017881 | |||||||
NDB | locus_tag | CELE_F28A12.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017881|UniProtKB=Q22972 | |||||||
family | PTHR47966 | ||||||||
NCBI | gene | 179247 | |||||||
RefSeq | protein | NM_072831.7 | |||||||
TREEFAM | TREEFAM_ID | TF315800 | |||||||
TrEMBL | UniProtAcc | Q22972 | |||||||
UniProt_GCRP | UniProtAcc | Q22972 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-13 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | asp | ||||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00073043 | ||||||||
00073044 | |||||||||
00073045 | |||||||||
00073046 | |||||||||
00073047 | |||||||||
00117940 | |||||||||
00117941 | |||||||||
Contained_in_operon | CEOP5208 | ||||||||
Ortholog (26) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F28A12.4 | |||||||
Corresponding_transcript | F28A12.4.1 | ||||||||
Other_sequence | CBC09928_1 | ||||||||
CR02428 | |||||||||
CBC09588_1 | |||||||||
CBC00665_1 | |||||||||
CR11450 | |||||||||
CRC12045_1 | |||||||||
CRC05962_1 | |||||||||
CJC03925_1 | |||||||||
Associated_feature (15) | |||||||||
Experimental_info | RNAi_result | WBRNAi00076354 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031510 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045774 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045773 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089061 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014020 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012190 | ||||||||
Expr1037684 | |||||||||
Expr1149685 | |||||||||
Expr2009461 | |||||||||
Expr2027698 | |||||||||
Drives_construct | WBCnstr00026943 | ||||||||
Construct_product | WBCnstr00026943 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (338) | |||||||||
Interaction (140) | |||||||||
Map_info | Map | V | Position | 1.52989 | |||||
Positive | Positive_clone | F28A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00026592 | ||||||||
WBPaper00028482 | |||||||||
WBPaper00029197 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00059755 | |||||||||
WBPaper00065026 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |