WormBase Tree Display for Gene: WBGene00017633
expand all nodes | collapse all nodes | view schema
| WBGene00017633 | SMap | S_parent | Sequence | F20D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F20D6.1 | |||||||
| Molecular_name | F20D6.1 | ||||||||
| F20D6.1.1 | |||||||||
| CE47280 | |||||||||
| Other_name | CELE_F20D6.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F20D6.1 | ||||||||
| DB_info | Database | AceView | gene | 5I671 | |||||
| WormQTL | gene | WBGene00017633 | |||||||
| WormFlux | gene | WBGene00017633 | |||||||
| NDB | locus_tag | CELE_F20D6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017633|UniProtKB=Q19653 | |||||||
| family | PTHR31327 | ||||||||
| NCBI | gene | 184722 | |||||||
| RefSeq | protein | NM_072709.5 | |||||||
| TREEFAM | TREEFAM_ID | TF317886 | |||||||
| TrEMBL | UniProtAcc | Q19653 | |||||||
| UniProt_GCRP | UniProtAcc | Q19653 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00007733 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00009581 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011241 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013085 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016730 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016807 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017559 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017902 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020661 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in AFD; germ line; and in male based on RNA-seq studies. Is affected by several genes including nuo-6; atfs-1; and etr-1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including methylmercuric chloride; Cry5B; and Doxycycline based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Uncharacterized protein T15H9.4-like and PDZ superfamily. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20D6.1 | |||||||
| Corresponding_CDS_history | F20D6.1:wp215 | ||||||||
| F20D6.1:wp230 | |||||||||
| Corresponding_transcript | F20D6.1.1 | ||||||||
| Associated_feature | WBsf232073 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00013621 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045108 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027227 | ||||||||
| Expr1149058 | |||||||||
| Drives_construct | WBCnstr00027145 | ||||||||
| Construct_product | WBCnstr00027145 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction | WBInteraction000141998 | ||||||||
| WBInteraction000208031 | |||||||||
| WBInteraction000398655 | |||||||||
| Map_info | Positive | Positive_clone | F20D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.17303 | |||||||
| Method | Gene |
