WormBase Tree Display for Gene: WBGene00017450
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| WBGene00017450 | SMap | S_parent | Sequence | F14D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bath-27 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F14D2.1 | ||||||||
| Molecular_name | F14D2.1 | ||||||||
| F14D2.1.1 | |||||||||
| CE16976 | |||||||||
| F14D2.1.2 | |||||||||
| Other_name | F14D2.o | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F14D2.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | bath-27 | ||||||||
| DB_info | Database | AceView | gene | 2D651 | |||||
| WormQTL | gene | WBGene00017450 | |||||||
| WormFlux | gene | WBGene00017450 | |||||||
| NDB | locus_tag | CELE_F14D2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017450|UniProtKB=O44810 | |||||||
| family | PTHR22743 | ||||||||
| NCBI | gene | 173679 | |||||||
| RefSeq | protein | NM_001393035.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315997 | |||||||
| TrEMBL | UniProtAcc | O44810 | |||||||
| UniProt_GCRP | UniProtAcc | O44810 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-27 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele (194) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2680 | ||||||||
| Ortholog (13) | |||||||||
| Paralog (81) | |||||||||
| Structured_description | Automated_description | Enriched in PVP; germ line; germline precursor cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including atfs-1; etr-1; and hsp-6 based on microarray and RNA-seq studies. Is affected by twelve chemicals including metformin; rifampin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily; BTB and MATH domain-containing protein; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F14D2.1 | |||||||
| Corresponding_transcript | F14D2.1.1 | ||||||||
| F14D2.1.2 | |||||||||
| Associated_feature | WBsf221001 | ||||||||
| WBsf221002 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1014141 | ||||||||
| Expr1148545 | |||||||||
| Expr2009543 | |||||||||
| Expr2027780 | |||||||||
| Drives_construct | WBCnstr00027289 | ||||||||
| Construct_product | WBCnstr00027289 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | II | Position | -6.47271 | Error | 0.024009 | |||
| Positive | Positive_clone | F14D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
