WormBase Tree Display for Gene: WBGene00017300
expand all nodes | collapse all nodes | view schema
| WBGene00017300 | SMap | S_parent | Sequence | F09F7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rpc-2 | Person_evidence | WBPerson10054 | |||||
| Sequence_name | F09F7.3 | ||||||||
| Molecular_name | F09F7.3 | ||||||||
| F09F7.3.1 | |||||||||
| CE30653 | |||||||||
| Other_name | CELE_F09F7.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rpc-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2012 14:29:00 | WBPerson2970 | Name_change | CGC_name | rpc-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpc | ||||||||
| Allele (93) | |||||||||
| Strain | WBStrain00037354 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP3308 | ||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00008781 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016140 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity; RNA polymerase I activity; and ribonucleoside binding activity. Predicted to be involved in DNA-templated transcription. Predicted to be located in mitochondrion. Predicted to be part of RNA polymerase III complex. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease and hypomyelinating leukodystrophy 8. Is an ortholog of human POLR3B (RNA polymerase III subunit B). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10595 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30348) | ||||
| DOID:0060797 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30348) | ||||||
| Molecular_info | Corresponding_CDS | F09F7.3 | |||||||
| Corresponding_transcript | F09F7.3.1 | ||||||||
| Other_sequence (41) | |||||||||
| Associated_feature | WBsf658957 | ||||||||
| WBsf658958 | |||||||||
| WBsf992440 | |||||||||
| WBsf992441 | |||||||||
| WBsf1014908 | |||||||||
| WBsf224950 | |||||||||
| WBsf224951 | |||||||||
| Experimental_info | RNAi_result (39) | ||||||||
| Expr_pattern | Expr1023913 | ||||||||
| Expr1037434 | |||||||||
| Expr1148122 | |||||||||
| Expr2015433 | |||||||||
| Expr2033668 | |||||||||
| Drives_construct | WBCnstr00027410 | ||||||||
| Construct_product | WBCnstr00027410 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (133) | |||||||||
| SAGE_tag (17) | |||||||||
| Interaction (293) | |||||||||
| Map_info | Map | III | Position | -1.54506 | |||||
| Positive | Positive_clone | F09F7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
