WormBase Tree Display for Gene: WBGene00016800
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| WBGene00016800 | SMap | S_parent | Sequence | C50C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spc-2 | Person_evidence | WBPerson389 | |||||
| Sequence_name | C50C3.2 | ||||||||
| Molecular_name | C50C3.2 | ||||||||
| C50C3.2.1 | |||||||||
| CE47978 | |||||||||
| Other_name | CELE_C50C3.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | spc-2 | ||||||||
| DB_info | Database | AceView | gene | 3J277 | |||||
| WormQTL | gene | WBGene00016800 | |||||||
| WormFlux | gene | WBGene00016800 | |||||||
| NDB | locus_tag | CELE_C50C3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016800|UniProtKB=P34367 | |||||||
| family | PTHR11915 | ||||||||
| NCBI | gene | 176154 | |||||||
| RefSeq | protein | NM_066386.5 | |||||||
| SwissProt | UniProtAcc | P34367 | |||||||
| TREEFAM | TREEFAM_ID | TF352470 | |||||||
| UniProt_GCRP | UniProtAcc | P34367 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Jan 2024 23:28:21 | WBPerson51134 | Name_change | CGC_name | spc-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spc | ||||||||
| Allele (95) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043822 | ||||||||
| 00043823 | |||||||||
| 00043824 | |||||||||
| 00043825 | |||||||||
| 00043826 | |||||||||
| 00043827 | |||||||||
| 00043828 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable actin filament binding activity. Predicted to be involved in actin cytoskeleton organization. Predicted to be located in several cellular components, including cell junction; cortical actin cytoskeleton; and plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50C3.2 | |||||||
| Corresponding_CDS_history | C50C3.2:wp227 | ||||||||
| C50C3.2:wp234 | |||||||||
| Corresponding_transcript | C50C3.2.1 | ||||||||
| Other_sequence | CGC00454_1 | ||||||||
| Associated_feature | WBsf225367 | ||||||||
| WBsf225368 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00066630 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042872 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012197 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011278 | ||||||||
| Expr1146852 | |||||||||
| Expr2001806 | |||||||||
| Expr2020032 | |||||||||
| Drives_construct | WBCnstr00027796 | ||||||||
| Construct_product | WBCnstr00027796 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (205) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | III | Position | -0.37371 | |||||
| Positive | Positive_clone | C50C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
