WormBase Tree Display for Gene: WBGene00016652
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| WBGene00016652 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | got-2.1 | Person_evidence | WBPerson151 | |||||
| WBPerson14155 | |||||||||
| Sequence_name | C44E4.3 | ||||||||
| Molecular_name | C44E4.3 | ||||||||
| C44E4.3.1 | |||||||||
| CE34271 | |||||||||
| Other_name | CELE_C44E4.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | got-2.1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 Aug 2011 09:11:34 | WBPerson2970 | Name_change | CGC_name | got-2.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | got | ||||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP1196 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00015778 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020146 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable L-aspartate:2-oxoglutarate aminotransferase activity. Predicted to be involved in aspartate catabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 82. Is an ortholog of human GOT2 (glutamic-oxaloacetic transaminase 2). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080715 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4433) | ||||
| Molecular_info | Corresponding_CDS | C44E4.3 | |||||||
| Corresponding_CDS_history | C44E4.3:wp101 | ||||||||
| Corresponding_transcript | C44E4.3.1 | ||||||||
| Other_sequence | JK315402.1 | ||||||||
| CBC02092_1 | |||||||||
| CBC06637_1 | |||||||||
| MP00936 | |||||||||
| CGC01073_1 | |||||||||
| DN190654.1 | |||||||||
| FC816388.1 | |||||||||
| EY469638.1 | |||||||||
| Associated_feature | WBsf219295 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00082587 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029808 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004532 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003153 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042485 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072971 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082486 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061752 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023290 | ||||||||
| Expr1037158 | |||||||||
| Expr1146471 | |||||||||
| Expr2012179 | |||||||||
| Expr2030415 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction (133) | |||||||||
| Map_info | Map | I | Position | -1.03544 | Error | 0.000534 | |||
| Positive | Positive_clone | C44E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040475 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00066405 | |||||||||
| WBPaper00066610 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
