Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00016486

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00016486SMapS_parentSequenceC36C9
IdentityVersion2
NameCGC_namefbxa-170Person_evidenceWBPerson655
Sequence_nameC36C9.3
Molecular_nameC36C9.3
C36C9.3.1
CE19722
Other_nameCELE_C36C9.3Accession_evidenceNDBBX284606
Public_namefbxa-170
DB_infoDatabaseAceViewgeneXC288
WormQTLgeneWBGene00016486
WormFluxgeneWBGene00016486
NDBlocus_tagCELE_C36C9.3
PanthergeneCAEEL|WormBase=WBGene00016486|UniProtKB=Q9TZK9
familyPTHR23015
NCBIgene183273
RefSeqproteinNM_075908.4
TREEFAMTREEFAM_IDTF321294
TrEMBLUniProtAccQ9TZK9
UniProt_GCRPUniProtAccQ9TZK9
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
201 Mar 2007 11:55:18WBPerson2970Name_changeCGC_namefbxa-170
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxa
Allele (40)
RNASeq_FPKM (74)
OrthologWBGene00073306Caenorhabditis remaneiFrom_analysisOMA
WBGene00061145Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00082006Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00141011Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00146915Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00145440Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00144636Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00163828Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00027399Caenorhabditis briggsaeFrom_analysisInparanoid_8
chrX_pilon.g18487Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (220)
Structured_descriptionConcise_descriptionThis gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.Paper_evidenceWBPaper00012854
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnriched in Q cell; Y cell; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including cyc-1; puf-8; and nuo-6 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including bisphenol A; Alovudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; FTH domain; Mos1 transposase, HTH domain; HTH domain in Mos1 transposase; and Domain of unknown function DUF38/FTH, Caenorhabditis species.Paper_evidenceWBPaper00065943
WBPaper00067038
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS296 version of WormBase
Date_last_updated20 Mar 2025 00:00:00
Molecular_infoCorresponding_CDSC36C9.3
Corresponding_transcriptC36C9.3.1
Other_sequenceTcir_isotig08306
Associated_featureWBsf1004126
WBsf1004127
WBsf1022332
WBsf1022333
WBsf237024
Experimental_infoRNAi_resultWBRNAi00011700Inferred_automaticallyRNAi_primary
WBRNAi00062151Inferred_automaticallyRNAi_primary
WBRNAi00029613Inferred_automaticallyRNAi_primary
WBRNAi00042067Inferred_automaticallyRNAi_primary
Expr_patternExpr1015605
Expr1037067
Expr1146065
Expr2011496
Expr2029733
Drives_constructWBCnstr00028028
Construct_productWBCnstr00028028
Microarray_results (17)
Expression_cluster (177)
Interaction (29)
Map_infoMapXPosition-17.7916
PositivePositive_cloneC36C9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00012854
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene