WormBase Tree Display for Gene: WBGene00016470
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| WBGene00016470 | SMap | S_parent | Sequence | C36C5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | srab-5 | Person_evidence | WBPerson1482 | ||||||
| Sequence_name | C36C5.1 | |||||||||
| Molecular_name | C36C5.1a | |||||||||
| C36C5.1b | ||||||||||
| Other_name | CELE_C36C5.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srab-5 | |||||||||
| DB_info | Database | AceView | gene | 5D649 | ||||||
| WormQTL | gene | WBGene00016470 | ||||||||
| NDB | locus_tag | CELE_C36C5.1 | ||||||||
| NCBI | gene | 13212191 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 06 Jan 2005 11:57:14 | WBPerson2970 | Name_change | CGC_name | srab-5 | |||||
| 3 | 28 Feb 2005 11:32:21 | WBPerson1849 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srab | |||||||||
| Allele (37) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00020623 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in anterior distal tip cell based on single-cell RNA-seq studies. Is affected by several genes including clk-1; hlh-26; and ogt-1 based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | ||||||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | |||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C36C5.1:wp140 | ||||||||
| Corresponding_pseudogene | C36C5.1a | |||||||||
| C36C5.1b | ||||||||||
| Corresponding_pseudogene_history | C36C5.1:wp251 | |||||||||
| Experimental_info | Expr_pattern | Expr5442 | ||||||||
| Drives_construct | WBCnstr00003668 | |||||||||
| Microarray_results (11) | ||||||||||
| Expression_cluster (13) | ||||||||||
| Map_info | Map | V | Position | -12.721 | Error | 0.002234 | ||||
| Positive | Positive_clone | C36C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00024667 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
