WormBase Tree Display for Gene: WBGene00015867
expand all nodes | collapse all nodes | view schema
WBGene00015867 | SMap | S_parent | Sequence | C16H3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ncs-7 | Person_evidence | WBPerson260 | |||||
Sequence_name | C16H3.1 | ||||||||
Molecular_name | C16H3.1a | ||||||||
C16H3.1a.1 | |||||||||
CE53241 | |||||||||
C16H3.1b | |||||||||
CE53380 | |||||||||
C16H3.1b.1 | |||||||||
Other_name | CELE_C16H3.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ncs-7 | ||||||||
DB_info | Database | AceView | gene | XS233 | |||||
WormQTL | gene | WBGene00015867 | |||||||
WormFlux | gene | WBGene00015867 | |||||||
NDB | locus_tag | CELE_C16H3.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015867|UniProtKB=Q94172 | |||||||
family | PTHR23055 | ||||||||
NCBI | gene | 182694 | |||||||
RefSeq | protein | NM_001373632.3 | |||||||
NM_001373633.4 | |||||||||
TrEMBL | UniProtAcc | A0A4V0IK35 | |||||||
A0A4V0ILQ4 | |||||||||
UniProt_GCRP | UniProtAcc | A0A4V0IK35 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Mar 2012 14:04:45 | WBPerson2970 | Name_change | CGC_name | ncs-7 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ncs | ||||||||
Allele (65) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00003561 | ||||||||
00116360 | |||||||||
Ortholog (47) | |||||||||
Paralog | WBGene00003563 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00003564 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003565 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00008307 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00008998 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021116 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00007710 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Expressed in neurons and vulval muscle. Is an ortholog of human KCNIP1 (potassium voltage-gated channel interacting protein 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C16H3.1a | |||||||
C16H3.1b | |||||||||
Corresponding_CDS_history | C16H3.1:wp107 | ||||||||
C16H3.1:wp271 | |||||||||
Corresponding_transcript | C16H3.1a.1 | ||||||||
C16H3.1b.1 | |||||||||
Associated_feature | WBsf1008971 | ||||||||
WBsf1008972 | |||||||||
WBsf1008973 | |||||||||
WBsf1025066 | |||||||||
WBsf1025067 | |||||||||
WBsf1025068 | |||||||||
Experimental_info | RNAi_result | WBRNAi00028980 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040747 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010875 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9893 | ||||||||
Expr12201 | |||||||||
Expr1018150 | |||||||||
Expr1144788 | |||||||||
Expr2013916 | |||||||||
Expr2032156 | |||||||||
Drives_construct | WBCnstr00009830 | ||||||||
WBCnstr00014382 | |||||||||
WBCnstr00020401 | |||||||||
WBCnstr00028500 | |||||||||
Construct_product | WBCnstr00009830 | ||||||||
WBCnstr00014382 | |||||||||
WBCnstr00020401 | |||||||||
WBCnstr00028500 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (63) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | X | Position | 24.5429 | |||||
Positive | Positive_clone | C16H3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00030467 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |