WormBase Tree Display for Gene: WBGene00015607

WBGene00015607 SMap: S_parent: Sequence: C08F1
  Identity: Version: 2
    Name: CGC_name: fbxb-13 Person_evidence: WBPerson655
      Sequence_name: C08F1.3
      Molecular_name: C08F1.3
        C08F1.3.1
        CE08018
      Other_name: CELE_C08F1.3 Accession_evidence: NDB BX284602
      Public_name: fbxb-13
    DB_info: Database: AceView gene 2C79
        WormQTL gene WBGene00015607
        WormFlux gene WBGene00015607
        NDB locus_tag CELE_C08F1.3
        Panther gene CAEEL|WormBase=WBGene00015607|UniProtKB=O17178
          family PTHR22899
        NCBI gene 182411
        RefSeq protein NM_061678.4
        TrEMBL UniProtAcc O17178
        UniProt_GCRP UniProtAcc O17178
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (186)
    RNASeq_FPKM (74)
    Ortholog (21)
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalapaaaa; ABalappapa; ABplapppaa; ABplpaaaaa; and ABplpppaaa based on single-cell RNA-seq studies. Is affected by several genes including rsr-2; hsb-1; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by twelve chemicals including hydrogen sulfide; allantoin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated; F-box associated domain, type 2; and F-box domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: C08F1.3
    Corresponding_transcript: C08F1.3.1
    Associated_feature: WBsf643991
      WBsf643992
      WBsf986813
      WBsf986814
      WBsf1011631
      WBsf220877
  Experimental_info: RNAi_result: WBRNAi00028677 Inferred_automatically: RNAi_primary
      WBRNAi00040106 Inferred_automatically: RNAi_primary
      WBRNAi00010459 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026696
      Expr1036680
      Expr1144180
      Expr2011614
      Expr2029853
    Drives_construct: WBCnstr00028717
    Construct_product: WBCnstr00028717
    Microarray_results (16)
    Expression_cluster (107)
    Interaction (47)
  Map_info: Map: II Position: -14.4159 Error: 0.004892
    Positive: Positive_clone: C08F1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene