WormBase Tree Display for Gene: WBGene00015567
expand all nodes | collapse all nodes | view schema
WBGene00015567 | SMap | S_parent | Sequence | C07D10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | bath-44 | Person_evidence | WBPerson655 | |||||
Sequence_name | C07D10.2 | ||||||||
Molecular_name | C07D10.2a | ||||||||
C07D10.2a.1 | |||||||||
CE27057 | |||||||||
C07D10.2b | |||||||||
CE29072 | |||||||||
C07D10.2b.1 | |||||||||
Other_name | CELE_C07D10.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | bath-44 | ||||||||
DB_info | Database | AceView | gene | 2H687 | |||||
WormQTL | gene | WBGene00015567 | |||||||
WormFlux | gene | WBGene00015567 | |||||||
NDB | locus_tag | CELE_C07D10.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015567|UniProtKB=H2KYJ3 | |||||||
family | PTHR24413 | ||||||||
NCBI | gene | 174210 | |||||||
RefSeq | protein | NM_063149.5 | |||||||
NM_063148.7 | |||||||||
TREEFAM | TREEFAM_ID | TF313419 | |||||||
TrEMBL | UniProtAcc | Q17782 | |||||||
H2KYJ3 | |||||||||
UniProt_GCRP | UniProtAcc | H2KYJ3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-44 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | bath | ||||||||
Allele (33) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00020569 | ||||||||
00020570 | |||||||||
00020571 | |||||||||
00020572 | |||||||||
00020573 | |||||||||
00020574 | |||||||||
Ortholog (39) | |||||||||
Paralog | WBGene00003209 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00011815 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00016803 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00018137 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00007778 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00009820 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018946 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | The C07D10.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and regulation of proteolysis. Predicted to be located in cytoplasm and nucleus. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C07D10.2a | |||||||
C07D10.2b | |||||||||
Corresponding_transcript | C07D10.2a.1 | ||||||||
C07D10.2b.1 | |||||||||
Other_sequence (24) | |||||||||
Associated_feature (17) | |||||||||
Experimental_info | RNAi_result | WBRNAi00088608 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082914 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000582 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039990 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010379 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00085655 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088715 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr413 | ||||||||
Expr1012215 | |||||||||
Expr1036668 | |||||||||
Expr1144069 | |||||||||
Expr2009561 | |||||||||
Expr2027798 | |||||||||
Drives_construct | WBCnstr00028745 | ||||||||
Construct_product | WBCnstr00028745 | ||||||||
Microarray_results (31) | |||||||||
Expression_cluster (118) | |||||||||
Interaction (48) | |||||||||
Map_info | Map | II | Position | 0.502905 | Error | 1.5e-05 | |||
Positive | Positive_clone | C07D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035598 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |