WormBase Tree Display for Gene: WBGene00015164
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WBGene00015164 | SMap | S_parent | Sequence | B0361 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ykt-6 | Person_evidence | WBPerson3094 | |||||
Sequence_name | B0361.10 | ||||||||
Molecular_name | B0361.10 | ||||||||
B0361.10.1 | |||||||||
CE20451 | |||||||||
B0361.10.2 | |||||||||
Other_name | Ce-Ykt6p | Paper_evidence | WBPaper00046399 | ||||||
CELE_B0361.10 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | ykt-6 | ||||||||
DB_info | Database | AceView | gene | 3I376C | |||||
3I376 | |||||||||
WormQTL | gene | WBGene00015164 | |||||||
WormFlux | gene | WBGene00015164 | |||||||
NDB | locus_tag | CELE_B0361.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015164|UniProtKB=Q9TXZ9 | |||||||
family | PTHR45806 | ||||||||
NCBI | gene | 176031 | |||||||
RefSeq | protein | NM_001392142.1 | |||||||
TREEFAM | TREEFAM_ID | TF105606 | |||||||
TrEMBL | UniProtAcc | Q9TXZ9 | |||||||
UniProt_GCRP | UniProtAcc | Q9TXZ9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Feb 2009 11:01:27 | WBPerson2970 | Name_change | CGC_name | ykt-6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ykt | ||||||||
Allele (27) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Contained_in_operon | CEOP3426 | ||||||||
Ortholog (33) | |||||||||
Paralog | WBGene00004897 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00004898 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00004899 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00007200 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00014084 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018853 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00022077 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00044062 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable SNAP receptor activity and protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; vesicle docking involved in exocytosis; and vesicle targeting. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and plasma membrane. Is an ortholog of human YKT6 (YKT6 v-SNARE homolog). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | B0361.10 | |||||||
Corresponding_transcript | B0361.10.1 | ||||||||
B0361.10.2 | |||||||||
Other_sequence (22) | |||||||||
Associated_feature | WBsf226951 | ||||||||
Experimental_info | RNAi_result (70) | ||||||||
Expr_pattern | Expr1024405 | ||||||||
Expr1036492 | |||||||||
Expr1143141 | |||||||||
Expr2018118 | |||||||||
Expr2036255 | |||||||||
Drives_construct | WBCnstr00008436 | ||||||||
WBCnstr00029038 | |||||||||
Construct_product | WBCnstr00029038 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (93) | |||||||||
Interaction (94) | |||||||||
Map_info | Map | III | Position | -0.756616 | Error | 0.000994 | |||
Positive | Positive_clone | B0361 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00034768 | ||||||||
WBPaper00035228 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00039068 | |||||||||
WBPaper00040996 | |||||||||
WBPaper00046399 | |||||||||
WBPaper00049531 | |||||||||
WBPaper00052095 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |