WormBase Tree Display for Gene: WBGene00014989
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| WBGene00014989 | SMap | S_parent | Sequence | ZK675 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | best-23 | Person_evidence | WBPerson260 | |||||
| Sequence_name | ZK675.3 | ||||||||
| Molecular_name | ZK675.3a | ||||||||
| ZK675.3a.1 | |||||||||
| CE01722 | |||||||||
| ZK675.3b | |||||||||
| Other_name | CELE_ZK675.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | best-23 | ||||||||
| DB_info | Database | AceView | gene | 2I196 | |||||
| WormFlux | gene | WBGene00014989 | |||||||
| NDB | locus_tag | CELE_ZK675.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00014989|UniProtKB=A5JYR2 | |||||||
| family | PTHR10736 | ||||||||
| NCBI | gene | 6418643 | |||||||
| RefSeq | protein | NM_001129196.5 | |||||||
| NR_023956.1 | |||||||||
| TrEMBL | UniProtAcc | A5JYR2 | |||||||
| UniProt_GCRP | UniProtAcc | A5JYR2 | |||||||
| RNAcentral | URSid | URS0000182276 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 27 May 2004 15:23:24 | WBPerson1971 | Event | Imported | Initial conversion from Pseudogene class of WS125 | ||
| 2 | 07 Feb 2012 16:30:56 | WBPerson2970 | Name_change | CGC_name | best-23 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | best | ||||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (33) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Automated_description | Predicted to enable chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of chloride channel complex. Human ortholog(s) of this gene implicated in autosomal dominant vitreoretinochoroidopathy and retinal degeneration (multiple). Is an ortholog of several human genes including BEST1 (bestrophin 1); BEST2 (bestrophin 2); and BEST3 (bestrophin 3). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK675.3a | |||||||
| Corresponding_CDS_history | ZK675.3:wp39 | ||||||||
| ZK675.3:wp91 | |||||||||
| Corresponding_transcript | ZK675.3b | ||||||||
| ZK675.3a.1 | |||||||||
| Corresponding_pseudogene_history | ZK675.3:wp175 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf665750 | ||||||||
| WBsf665751 | |||||||||
| WBsf988600 | |||||||||
| WBsf988601 | |||||||||
| WBsf223416 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022121 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021102 | ||||||||
| Expr1036409 | |||||||||
| Expr1163062 | |||||||||
| Expr2009605 | |||||||||
| Expr2027842 | |||||||||
| Drives_construct | WBCnstr00029173 | ||||||||
| Construct_product | WBCnstr00029173 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (131) | |||||||||
| Map_info | Map | II | Position | 0.609528 | |||||
| Positive | Positive_clone | ZK675 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
