WormBase Tree Display for Gene: WBGene00013391

WBGene00013391 SMap: S_parent: Sequence: Y62H9A
  Identity: Version: 2
    Name: CGC_name: Y62H9A.3
      Sequence_name: Y62H9A.3
      Molecular_name: Y62H9A.3
        Y62H9A.3.1
        CE19239
      Other_name: stha-1 Person_evidence: WBPerson7150
        CELE_Y62H9A.3 Accession_evidence: NDB BX284606
      Public_name: Y62H9A.3
    DB_info: Database: AceView gene XM498
        WormQTL gene WBGene00013391
        WormFlux gene WBGene00013391
        NDB locus_tag CELE_Y62H9A.3
        Panther gene CAEEL|WormBase=WBGene00013391|UniProtKB=Q9XWT5
          family PTHR38633
        NCBI gene 181363
        RefSeq protein NM_077583.9
        TREEFAM TREEFAM_ID TF322019
        TrEMBL UniProtAcc Q9XWT5
        UniProt_GCRP UniProtAcc Q9XWT5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 14 Jan 2025 23:38:50 WBPerson51134 Name_change: Other_name: stha-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (26)
    RNASeq_FPKM (74)
    Ortholog (16)
    Paralog: WBGene00008377 Caenorhabditis elegans From_analysis: Panther
      WBGene00013393 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00013394 Caenorhabditis elegans From_analysis: Panther
      WBGene00013392 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in RIM; interneuron; and spermatheca based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including cyc-1; dys-1; and swsn-2.2 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by twenty-one chemicals including ethanol; 1-methylnicotinamide; and rotenone based on RNA-seq; microarray; and proteomic studies. Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: Y62H9A.3
    Corresponding_transcript: Y62H9A.3.1
    Associated_feature: WBsf238013
      WBsf238014
  Experimental_info: RNAi_result: WBRNAi00057866 Inferred_automatically: RNAi_primary
      WBRNAi00021229 Inferred_automatically: RNAi_primary
      WBRNAi00037683 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015439
      Expr1161303
    Drives_construct: WBCnstr00029660
    Construct_product: WBCnstr00029660
    Microarray_results (19)
    Expression_cluster (258)
    Interaction (219)
  Map_info: Map: X Position: 6.74205
    Positive: Positive_clone: Y62H9A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene