WormBase Tree Display for Gene: WBGene00013196

WBGene00013196 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 2
    Name: CGC_name: tbc-20 Person_evidence: WBPerson524
            WBPerson293
      Sequence_name: Y54E2A.12
      Molecular_name: Y54E2A.12a
        Y54E2A.12a.1
        CE37068
        Y54E2A.12b
        CE48702
        Y54E2A.12b.1
      Other_name: CELE_Y54E2A.12 Accession_evidence: NDB BX284602
      Public_name: tbc-20
    DB_info: Database: AceView gene 2P85
        WormQTL gene WBGene00013196
        WormFlux gene WBGene00013196
        NDB locus_tag CELE_Y54E2A.12
        Panther gene CAEEL|WormBase=WBGene00013196|UniProtKB=Q9XWI2
          family PTHR20913
        NCBI gene 175139
        RefSeq protein NM_064667.5
            NM_001306609.3
        TrEMBL UniProtAcc Q9XWI2
            U4PB10
        UniProt_GCRP UniProtAcc Q9XWI2
        OMIM gene 611663
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 23 Jun 2008 18:34:24 WBPerson2970 Name_change: CGC_name: tbc-20
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tbc
    Allele (69)
    RNASeq_FPKM (74)
    GO_annotation: 00107523
      00107524
      00107525
      00107526
      00107527
      00124063
      00124064
      00124065
    Contained_in_operon: CEOP2755
    Ortholog (35)
    Structured_description: Automated_description: Predicted to enable GTPase activator activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in Warburg micro syndrome 4. Is an ortholog of human TBC1D20 (TBC1 domain family member 20). Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Disease_info: Potential_model: DOID:0110719 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:16133)
  Molecular_info: Corresponding_CDS: Y54E2A.12a
      Y54E2A.12b
    Corresponding_CDS_history: Y54E2A.12:wp128
    Corresponding_transcript: Y54E2A.12a.1
      Y54E2A.12b.1
    Other_sequence (23)
    Associated_feature: WBsf644873
      WBsf990817
      WBsf222510
  Experimental_info: RNAi_result: WBRNAi00007408 Inferred_automatically: RNAi_primary
      WBRNAi00076821 Inferred_automatically: RNAi_primary
      WBRNAi00020977 Inferred_automatically: RNAi_primary
      WBRNAi00057370 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015416
      Expr1035864
      Expr1160807
      Expr2017330
      Expr2035466
    Drives_construct: WBCnstr00029728
    Construct_product: WBCnstr00029728
    Microarray_results (24)
    Expression_cluster (90)
    Interaction: WBInteraction000046301
      WBInteraction000046320
      WBInteraction000046321
      WBInteraction000046322
      WBInteraction000370344
  Map_info: Map: II Position: 23.5007 Error: 0.008436
    Positive: Positive_clone: Y54E2A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene