WormBase Tree Display for Gene: WBGene00013181
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WBGene00013181 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y53H1B.2 | |||||||
Molecular_name | Y53H1B.2 | ||||||||
Y53H1B.2.1 | |||||||||
CE24431 | |||||||||
Other_name | CELE_Y53H1B.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | Y53H1B.2 | ||||||||
DB_info | Database | AceView | gene | 1L884 | |||||
WormQTL | gene | WBGene00013181 | |||||||
WormFlux | gene | WBGene00013181 | |||||||
NDB | locus_tag | CELE_Y53H1B.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013181|UniProtKB=G5EDV7 | |||||||
family | PTHR39385 | ||||||||
NCBI | gene | 173020 | |||||||
RefSeq | protein | NM_060498.7 | |||||||
TREEFAM | TREEFAM_ID | TF315763 | |||||||
TrEMBL | UniProtAcc | G5EDV7 | |||||||
UniProt_GCRP | UniProtAcc | G5EDV7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (28) | |||||||||
Paralog | WBGene00012646 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00014049 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
Structured_description | Automated_description | Enriched in several structures, including PLM; anterior hypodermis; body wall musculature; muscle cell; and rectal epithelial cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including cyc-1; nuo-6; and htz-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by twenty-one chemicals including aldicarb; diallyl trisulfide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y53H1B.2 | |||||||
Corresponding_transcript | Y53H1B.2.1 | ||||||||
Other_sequence (45) | |||||||||
Associated_feature | WBsf649619 | ||||||||
WBsf985254 | |||||||||
WBsf985255 | |||||||||
WBsf985256 | |||||||||
WBsf1010696 | |||||||||
WBsf1010697 | |||||||||
WBsf220326 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057329 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037449 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004717 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026604 | ||||||||
Expr1035857 | |||||||||
Expr1160767 | |||||||||
Expr2007882 | |||||||||
Expr2026123 | |||||||||
Drives_construct | WBCnstr00029734 | ||||||||
Construct_product | WBCnstr00029734 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (244) | |||||||||
Interaction | WBInteraction000544615 | ||||||||
WBInteraction000565293 | |||||||||
WBInteraction000568332 | |||||||||
WBInteraction000575858 | |||||||||
Map_info | Positive | Positive_clone | Y53H1B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 7.94033 | |||||||
Method | Gene |