WormBase Tree Display for Gene: WBGene00013171
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WBGene00013171 | SMap | S_parent | Sequence | Y53F4B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y53F4B.25 | |||||||
Molecular_name | Y53F4B.25a | ||||||||
Y53F4B.25a.1 | |||||||||
CE48632 | |||||||||
Y53F4B.25b | |||||||||
CE49101 | |||||||||
Y53F4B.25b.1 | |||||||||
Other_name | CELE_Y53F4B.25 | Accession_evidence | NDB | BX284602 | |||||
Public_name | Y53F4B.25 | ||||||||
DB_info | Database | AceView | gene | 2P429 | |||||
WormQTL | gene | WBGene00013171 | |||||||
WormFlux | gene | WBGene00013171 | |||||||
NDB | locus_tag | CELE_Y53F4B.25 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013171|UniProtKB=U4PEB1 | |||||||
family | PTHR46705 | ||||||||
NCBI | gene | 175163 | |||||||
RefSeq | protein | NM_001306624.3 | |||||||
NM_001306623.2 | |||||||||
TrEMBL | UniProtAcc | U4PEB1 | |||||||
U4PB30 | |||||||||
UniProt_GCRP | UniProtAcc | U4PEB1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (134) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (25) | |||||||||
Paralog (18) | |||||||||
Structured_description | Automated_description | Enriched in epithelial cell; germline precursor cell; hypodermis; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including atfs-1; mter-4; and rsr-2 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including Ethanol; methylmercury hydroxide; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y53F4B.25a | |||||||
Y53F4B.25b | |||||||||
Corresponding_CDS_history | Y53F4B.25:wp239 | ||||||||
Corresponding_transcript | Y53F4B.25a.1 | ||||||||
Y53F4B.25b.1 | |||||||||
Other_sequence | DAC02442_1 | ||||||||
ASC05310_1 | |||||||||
JI254898.1 | |||||||||
CR06062 | |||||||||
MJ05105 | |||||||||
DA04527 | |||||||||
CRC11508_1 | |||||||||
Associated_feature | WBsf644885 | ||||||||
WBsf658460 | |||||||||
WBsf990907 | |||||||||
WBsf990908 | |||||||||
WBsf990909 | |||||||||
WBsf1013950 | |||||||||
WBsf1013951 | |||||||||
WBsf222539 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057279 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020941 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020940 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027613 | ||||||||
Expr1035851 | |||||||||
Expr1160717 | |||||||||
Expr2007853 | |||||||||
Expr2026094 | |||||||||
Drives_construct | WBCnstr00029739 | ||||||||
Construct_product | WBCnstr00029739 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (199) | |||||||||
Map_info | Positive | Positive_clone | Y53F4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 24.1135 | |||||||
Method | Gene |