WormBase Tree Display for Gene: WBGene00013129
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| WBGene00013129 | SMap | S_parent | Sequence | Y52B11A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y52B11A.10 | |||||||
| Molecular_name | Y52B11A.10 | ||||||||
| Y52B11A.10.1 | |||||||||
| CE20298 | |||||||||
| Other_name | CELE_Y52B11A.10 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y52B11A.10 | ||||||||
| DB_info | Database | AceView | gene | 1L643 | |||||
| WormQTL | gene | WBGene00013129 | |||||||
| WormFlux | gene | WBGene00013129 | |||||||
| NDB | locus_tag | CELE_Y52B11A.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013129|UniProtKB=Q9U255 | |||||||
| family | PTHR18034 | ||||||||
| NCBI | gene | 173006 | |||||||
| RefSeq | protein | NM_060460.7 | |||||||
| TREEFAM | TREEFAM_ID | TF312808 | |||||||
| TrEMBL | UniProtAcc | Q9U255 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U255 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (194) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102509 | ||||||||
| 00102510 | |||||||||
| 00102511 | |||||||||
| 00102512 | |||||||||
| 00102513 | |||||||||
| 00124023 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00002957 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | Y52B11A.10 encodes a protein containing a MIF4G domain found in proteins involved in RNA metabolism; loss of Y52B11A.10 activity via RNAi results in pharyngeal morphology defects. | Paper_evidence | WBPaper00040399 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 16 Nov 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to be located in nucleolus. Is an ortholog of human NOM1 (nucleolar protein with MIF4G domain 1). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y52B11A.10 | |||||||
| Corresponding_transcript | Y52B11A.10.1 | ||||||||
| Other_sequence (39) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037384 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00106943 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057219 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002331 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110759 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117003 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022486 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010479 | ||||||||
| Expr1035824 | |||||||||
| Expr1160654 | |||||||||
| Expr2007810 | |||||||||
| Expr2026050 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction (101) | |||||||||
| Map_info | Positive | Positive_clone | Y52B11A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 6.50334 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040399 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00066805 | |||||||||
| WBPaper00067549 | |||||||||
| Method | Gene |
