WormBase Tree Display for Gene: WBGene00013081
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WBGene00013081 | SMap | S_parent | Sequence | Y51A2D | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | txt-14 | Person_evidence | WBPerson19237 | |||||
Sequence_name | Y51A2D.14 | ||||||||
Molecular_name | Y51A2D.14 | ||||||||
Y51A2D.14.1 | |||||||||
CE19210 | |||||||||
Y51A2D.14.2 | |||||||||
Other_name | CELE_Y51A2D.14 | Accession_evidence | NDB | BX284605 | |||||
Public_name | txt-14 | ||||||||
DB_info | Database | AceView | gene | 5T63 | |||||
WormQTL | gene | WBGene00013081 | |||||||
WormFlux | gene | WBGene00013081 | |||||||
NDB | locus_tag | CELE_Y51A2D.14 | |||||||
NCBI | gene | 180214 | |||||||
RefSeq | protein | NM_075232.9 | |||||||
TrEMBL | UniProtAcc | Q9XXR2 | |||||||
UniProt_GCRP | UniProtAcc | Q9XXR2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 28 Jan 2020 11:43:42 | WBPerson1983 | Name_change | CGC_name | txt-14 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | txt | ||||||||
Allele (14) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00107817 | Pristionchus pacificus | From_analysis | OMA | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00107818 | Pristionchus pacificus | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WBGene00156846 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00027966 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00069817 | Caenorhabditis remanei | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00027965 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_02160.g25171 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_19573 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
Sp34_50385720 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00016923 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
WormBase-Compara | |||||||||
WBGene00271796 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including GLR; RIGL; body wall musculature; mechanosensory neurons; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including nuo-6; atp-2; and etr-1 based on RNA-seq and microarray studies. Is affected by eighteen chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y51A2D.14 | |||||||
Corresponding_transcript | Y51A2D.14.1 | ||||||||
Y51A2D.14.2 | |||||||||
Other_sequence (17) | |||||||||
Associated_feature | WBsf655140 | ||||||||
WBsf1002944 | |||||||||
WBsf1002945 | |||||||||
WBsf1002946 | |||||||||
WBsf1002947 | |||||||||
WBsf1002948 | |||||||||
WBsf1021502 | |||||||||
WBsf1021503 | |||||||||
WBsf1021504 | |||||||||
WBsf1021505 | |||||||||
Experimental_info | RNAi_result | WBRNAi00020870 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057130 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037345 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019305 | ||||||||
Expr1160578 | |||||||||
Expr2007771 | |||||||||
Expr2026011 | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (137) | |||||||||
Interaction (16) | |||||||||
Map_info | Map | V | Position | 16.9455 | |||||
Positive | Positive_clone | Y51A2D | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00060839 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |