WormBase Tree Display for Gene: WBGene00012925
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WBGene00012925 | SMap | S_parent | Sequence | Y47D3A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | wht-8 | Person_evidence | WBPerson253 | |||||
Sequence_name | Y47D3A.11 | ||||||||
Molecular_name | Y47D3A.11 | ||||||||
Y47D3A.11.1 | |||||||||
CE44357 | |||||||||
Other_name | CELE_Y47D3A.11 | Accession_evidence | NDB | BX284603 | |||||
Public_name | wht-8 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jun 2007 15:54:19 | WBPerson2970 | Name_change | CGC_name | wht-8 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | wht | ||||||||
Allele (62) | |||||||||
Strain | WBStrain00032967 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00094134 | ||||||||
00094135 | |||||||||
00094136 | |||||||||
00094137 | |||||||||
00094138 | |||||||||
00094139 | |||||||||
00114653 | |||||||||
00114654 | |||||||||
00114655 | |||||||||
00114656 | |||||||||
Ortholog (43) | |||||||||
Paralog | WBGene00006522 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00007060 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00007513 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00007631 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00008950 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015479 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017179 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021535 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016973 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including gout; hematologic cancer (multiple); and toxic encephalopathy. Is an ortholog of human ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group)). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:8552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
DOID:3602 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:3459 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:707 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:9952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:8761 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:13189 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:9538 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
DOID:9119 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
Molecular_info | Corresponding_CDS | Y47D3A.11 | |||||||
Corresponding_CDS_history | Y47D3A.11:wp210 | ||||||||
Corresponding_transcript | Y47D3A.11.1 | ||||||||
Other_sequence | JO468408.1 | ||||||||
Dviv_isotig27884 | |||||||||
DVC02508_1 | |||||||||
Tcol_isotig17787 | |||||||||
EV853208.1 | |||||||||
Dviv_isotig18534 | |||||||||
Dviv_isotig18533 | |||||||||
Associated_feature | WBsf994303 | ||||||||
WBsf994304 | |||||||||
WBsf994305 | |||||||||
WBsf994306 | |||||||||
WBsf1015947 | |||||||||
WBsf1015948 | |||||||||
WBsf1015949 | |||||||||
WBsf1015950 | |||||||||
WBsf1015951 | |||||||||
Experimental_info | RNAi_result | WBRNAi00037153 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056730 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007090 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056729 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020696 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram637 | ||||||||
Expr1023413 | |||||||||
Expr1160197 | |||||||||
Expr2036206 | |||||||||
Drives_construct | WBCnstr00002852 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (150) | |||||||||
Interaction (38) | |||||||||
Map_info | Map | III | Position | 7.31108 | Error | 0.10177 | |||
Positive | Positive_clone | Y47D3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |