WormBase Tree Display for Gene: WBGene00012905
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WBGene00012905 | SMap | S_parent | Sequence | Y46G5A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y46G5A.14 | |||||||
Molecular_name | Y46G5A.14 | ||||||||
Y46G5A.14.1 | |||||||||
CE21989 | |||||||||
Y46G5A.14.2 | |||||||||
Other_name | CELE_Y46G5A.14 | Accession_evidence | NDB | BX284602 | |||||
Public_name | Y46G5A.14 | ||||||||
DB_info | Database | AceView | gene | 2N65 | |||||
WormQTL | gene | WBGene00012905 | |||||||
WormFlux | gene | WBGene00012905 | |||||||
NDB | locus_tag | CELE_Y46G5A.14 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012905|UniProtKB=Q9U2F4 | |||||||
family | PTHR37439 | ||||||||
NCBI | gene | 174910 | |||||||
RefSeq | protein | NM_064318.6 | |||||||
TREEFAM | TREEFAM_ID | TF320014 | |||||||
TrEMBL | UniProtAcc | Q9U2F4 | |||||||
UniProt_GCRP | UniProtAcc | Q9U2F4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (47) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (15) | |||||||||
Paralog | WBGene00011574 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020313 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021154 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012919 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in neurons; retrovesicular ganglion; and in male based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including numr-2; numr-1; and nuo-6 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; antimycin; and Ag nanoparticles based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y46G5A.14 | |||||||
Corresponding_transcript | Y46G5A.14.1 | ||||||||
Y46G5A.14.2 | |||||||||
Other_sequence | FG621256.1 | ||||||||
Tcir_isotig11370 | |||||||||
Associated_feature | WBsf990207 | ||||||||
WBsf1013503 | |||||||||
WBsf222291 | |||||||||
WBsf222292 | |||||||||
Experimental_info | RNAi_result | WBRNAi00001318 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078142 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020663 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103597 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037128 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00056672 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021224 | ||||||||
Expr1035712 | |||||||||
Expr1160143 | |||||||||
Expr2007580 | |||||||||
Expr2025816 | |||||||||
Drives_construct | WBCnstr00029795 | ||||||||
Construct_product | WBCnstr00029795 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (113) | |||||||||
Map_info | Positive | Positive_clone | Y46G5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 11.153 | |||||||
Method | Gene |