WormBase Tree Display for Gene: WBGene00012803
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WBGene00012803 | SMap | S_parent | Sequence | Y43F4B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pgm-2 | Person_evidence | WBPerson555 | |||
Sequence_name | Y43F4B.5 | ||||||
Molecular_name | Y43F4B.5a | ||||||
Y43F4B.5a.1 | |||||||
CE16630 | |||||||
Y43F4B.5b | |||||||
CE34117 | |||||||
Y43F4B.5b.1 | |||||||
Other_name | CELE_Y43F4B.5 | Accession_evidence | NDB | BX284603 | |||
Public_name | pgm-2 | ||||||
DB_info | Database | AceView | gene | 3O391 | |||
WormQTL | gene | WBGene00012803 | |||||
WormFlux | gene | WBGene00012803 | |||||
NDB | locus_tag | CELE_Y43F4B.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00012803|UniProtKB=O45934 | |||||
family | PTHR45745 | ||||||
NCBI | gene | 176749 | |||||
RefSeq | protein | NM_001027701.5 | |||||
NM_001027702.5 | |||||||
TREEFAM | TREEFAM_ID | TF300692 | |||||
TrEMBL | UniProtAcc | Q86DA0 | |||||
O45934 | |||||||
UniProt_GCRP | UniProtAcc | O45934 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pgm | ||||||
Allele (57) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00033825 | ||||||
00033826 | |||||||
00033827 | |||||||
00033828 | |||||||
00114577 | |||||||
00114578 | |||||||
00114579 | |||||||
Contained_in_operon | CEOP3776 | ||||||
Ortholog (50) | |||||||
Paralog | WBGene00009006 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00013690 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00019890 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable phosphopentomutase activity. Predicted to be involved in purine ribonucleoside salvage. Located in nucleus. Is an ortholog of human PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2 like 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y43F4B.5a | |||||
Y43F4B.5b | |||||||
Corresponding_transcript | Y43F4B.5a.1 | ||||||
Y43F4B.5b.1 | |||||||
Other_sequence (103) | |||||||
Associated_feature (14) | |||||||
Experimental_info | RNAi_result | WBRNAi00056491 | Inferred_automatically | RNAi_primary | |||
WBRNAi00056492 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00090785 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00009329 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002698 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002599 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037045 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00026703 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr9508 | ||||||
Expr1026569 | |||||||
Expr1035664 | |||||||
Expr1159960 | |||||||
Expr2007490 | |||||||
Expr2025726 | |||||||
Drives_construct | WBCnstr00029831 | ||||||
Construct_product | WBCnstr00014073 | ||||||
WBCnstr00029831 | |||||||
Microarray_results (27) | |||||||
Expression_cluster (97) | |||||||
SAGE_tag (11) | |||||||
Interaction (121) | |||||||
Map_info | Positive | Positive_clone | Y43F4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | III | 21.2081 | |||||
Reference | WBPaper00029024 | ||||||
WBPaper00038444 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Method | Gene |