WormBase Tree Display for Gene: WBGene00012803
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WBGene00012803 | SMap | S_parent | Sequence | Y43F4B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pgm-2 | Person_evidence | WBPerson555 | |||||
Sequence_name | Y43F4B.5 | ||||||||
Molecular_name | Y43F4B.5a | ||||||||
Y43F4B.5a.1 | |||||||||
CE16630 | |||||||||
Y43F4B.5b | |||||||||
CE34117 | |||||||||
Y43F4B.5b.1 | |||||||||
Other_name | CELE_Y43F4B.5 | Accession_evidence | NDB | BX284603 | |||||
Public_name | pgm-2 | ||||||||
DB_info | Database | AceView | gene | 3O391 | |||||
WormQTL | gene | WBGene00012803 | |||||||
WormFlux | gene | WBGene00012803 | |||||||
NDB | locus_tag | CELE_Y43F4B.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012803|UniProtKB=O45934 | |||||||
family | PTHR45745 | ||||||||
NCBI | gene | 176749 | |||||||
RefSeq | protein | NM_001027701.5 | |||||||
NM_001027702.5 | |||||||||
TREEFAM | TREEFAM_ID | TF300692 | |||||||
TrEMBL | UniProtAcc | Q86DA0 | |||||||
O45934 | |||||||||
UniProt_GCRP | UniProtAcc | O45934 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | pgm-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pgm | ||||||||
Allele (57) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033825 | ||||||||
00033826 | |||||||||
00033827 | |||||||||
00033828 | |||||||||
00114577 | |||||||||
00114578 | |||||||||
00114579 | |||||||||
Contained_in_operon | CEOP3776 | ||||||||
Ortholog (50) | |||||||||
Paralog | WBGene00009006 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00013690 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00019890 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable phosphopentomutase activity. Predicted to be involved in purine ribonucleoside salvage. Located in nucleus. Is an ortholog of human PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2 like 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00056491 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056492 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00090785 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009329 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002698 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002599 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037045 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026703 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9508 | ||||||||
Expr1026569 | |||||||||
Expr1035664 | |||||||||
Expr1159960 | |||||||||
Expr2007490 | |||||||||
Expr2025726 | |||||||||
Drives_construct | WBCnstr00029831 | ||||||||
Construct_product | WBCnstr00014073 | ||||||||
WBCnstr00029831 | |||||||||
Microarray_results (27) | |||||||||
Expression_cluster (97) | |||||||||
SAGE_tag (11) | |||||||||
Interaction (121) | |||||||||
Map_info | Positive | Positive_clone | Y43F4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 21.2081 | |||||||
Reference | WBPaper00029024 | ||||||||
WBPaper00038444 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |