WormBase Tree Display for Gene: WBGene00012512
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WBGene00012512 | SMap | S_parent | Sequence | Y26E6A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ekl-5 | Paper_evidence | WBPaper00031487 | |||||
Sequence_name | Y26E6A.1 | ||||||||
Molecular_name | Y26E6A.1a | ||||||||
Y26E6A.1a.1 | |||||||||
CE44333 | |||||||||
Y26E6A.1b | |||||||||
CE16607 | |||||||||
Y26E6A.1b.1 | |||||||||
Other_name | CELE_Y26E6A.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ekl-5 | ||||||||
DB_info | Database | AceView | gene | XO534 | |||||
WormQTL | gene | WBGene00012512 | |||||||
WormFlux | gene | WBGene00012512 | |||||||
NDB | locus_tag | CELE_Y26E6A.1 | |||||||
NCBI | gene | 181500 | |||||||
RefSeq | protein | NM_001404213.1 | |||||||
NM_077916.4 | |||||||||
TrEMBL | UniProtAcc | A0A8S4QFJ4 | |||||||
O62418 | |||||||||
UniProt_GCRP | UniProtAcc | O62418 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 20 Feb 2008 16:59:39 | WBPerson2970 | Name_change | CGC_name | ekl-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ekl | ||||||||
Allele (46) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOPX159 | ||||||||
Ortholog (32) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABplapapppp; ABprapapppp; germ line; intestine; and oocyte based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including cyc-1; htz-1; and isp-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by ten chemicals including bisphenol A; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y26E6A.1a | |||||||
Y26E6A.1b | |||||||||
Corresponding_CDS_history | Y26E6A.1:wp209 | ||||||||
Corresponding_transcript | Y26E6A.1a.1 | ||||||||
Y26E6A.1b.1 | |||||||||
Associated_feature | WBsf671221 | ||||||||
WBsf1007764 | |||||||||
WBsf1007765 | |||||||||
WBsf1007766 | |||||||||
WBsf1007767 | |||||||||
WBsf1024321 | |||||||||
WBsf1024322 | |||||||||
WBsf238178 | |||||||||
WBsf238179 | |||||||||
Experimental_info | RNAi_result | WBRNAi00055752 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036744 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020144 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013819 | ||||||||
Expr1035538 | |||||||||
Expr1159275 | |||||||||
Expr2011267 | |||||||||
Expr2029503 | |||||||||
Drives_construct | WBCnstr00029934 | ||||||||
Construct_product | WBCnstr00029934 | ||||||||
Microarray_results (23) | |||||||||
Expression_cluster (157) | |||||||||
Interaction | WBInteraction000344991 | ||||||||
WBInteraction000388672 | |||||||||
WBInteraction000425749 | |||||||||
WBInteraction000573747 | |||||||||
WBInteraction000574405 | |||||||||
Map_info | Map | X | Position | 15.1537 | Error | 0.038424 | |||
Positive | Positive_clone | Y26E6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00031487 | ||||||||
WBPaper00034527 | |||||||||
WBPaper00035005 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |