WormBase Tree Display for Gene: WBGene00012240
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| WBGene00012240 | SMap | S_parent | Sequence | W04A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W04A8.5 | |||||||
| Molecular_name | W04A8.5 | ||||||||
| W04A8.5.1 | |||||||||
| CE16539 | |||||||||
| Other_name | CELE_W04A8.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | W04A8.5 | ||||||||
| DB_info | Database | AceView | gene | 1O442 | |||||
| WormQTL | gene | WBGene00012240 | |||||||
| WormFlux | gene | WBGene00012240 | |||||||
| NDB | locus_tag | CELE_W04A8.5 | |||||||
| NCBI | gene | 173255 | |||||||
| RefSeq | protein | NM_061023.6 | |||||||
| TREEFAM | TREEFAM_ID | TF322394 | |||||||
| TrEMBL | UniProtAcc | Q9XUM1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUM1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrI_pilon.g2801 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including body wall muscle cell; germ line; neurons; oocyte; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including cyc-1; swsn-1; and mut-16 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including methylmercuric chloride; rotenone; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: F-box domain. | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W04A8.5 | |||||||
| Corresponding_transcript | W04A8.5.1 | ||||||||
| Associated_feature | WBsf649724 | ||||||||
| WBsf717598 | |||||||||
| WBsf985958 | |||||||||
| WBsf1011123 | |||||||||
| WBsf220556 | |||||||||
| WBsf220557 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036262 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054747 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004416 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061903 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018065 | ||||||||
| Expr1035420 | |||||||||
| Expr1158285 | |||||||||
| Expr2006759 | |||||||||
| Expr2024980 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction (206) | |||||||||
| Map_info | Positive | Positive_clone | W04A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 22.0245 | |||||||
| Reference | WBPaper00012854 | ||||||||
| WBPaper00066610 | |||||||||
| Method | Gene |
