WormBase Tree Display for Gene: WBGene00012238
expand all nodes | collapse all nodes | view schema
| WBGene00012238 | SMap | S_parent | Sequence | W04A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W04A8.3 | |||||||
| Molecular_name (3) | |||||||||
| Other_name | CELE_W04A8.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | W04A8.3 | ||||||||
| DB_info | Database | AceView | gene | 1O436 | |||||
| WormQTL | gene | WBGene00012238 | |||||||
| WormFlux | gene | WBGene00012238 | |||||||
| NDB | locus_tag | CELE_W04A8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012238|UniProtKB=Q9XUM2 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 173254 | |||||||
| RefSeq | protein | NM_061022.7 | |||||||
| TREEFAM | TREEFAM_ID | TF322394 | |||||||
| TrEMBL | UniProtAcc | Q9XUM2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUM2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrI_pilon.g2800 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (149) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; ABalaapaaa; ABalaappppa; amphid neurons; and oocyte based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including qui-1; rsr-2; and hsb-1 based on tiling array; microarray; and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; multi-walled carbon nanotube; and Alovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: F-box domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W04A8.3 | |||||||
| Corresponding_CDS_history | W04A8.3:wp192 | ||||||||
| Corresponding_transcript | W04A8.3.1 | ||||||||
| Associated_feature | WBsf649723 | ||||||||
| WBsf1011122 | |||||||||
| WBsf220555 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004414 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054745 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026483 | ||||||||
| Expr1158283 | |||||||||
| Expr2006757 | |||||||||
| Expr2024978 | |||||||||
| Drives_construct | WBCnstr00030052 | ||||||||
| Construct_product | WBCnstr00030052 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction | WBInteraction000152966 | ||||||||
| WBInteraction000250968 | |||||||||
| WBInteraction000407465 | |||||||||
| Map_info | Positive | Positive_clone | W04A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 22.0177 | |||||||
| Method | Gene |
