WormBase Tree Display for Gene: WBGene00012216
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WBGene00012216 | SMap | S_parent | Sequence | W02D9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | dpsm-1 | Paper_evidence | WBPaper00062579 | |||||
Person_evidence | WBPerson8413 | ||||||||
Sequence_name | W02D9.10 | ||||||||
Molecular_name | W02D9.10 | ||||||||
W02D9.10.1 | |||||||||
CE14472 | |||||||||
Other_name | CELE_W02D9.10 | Accession_evidence | NDB | BX284601 | |||||
Public_name | dpsm-1 | ||||||||
DB_info | Database | AceView | gene | 1N143 | |||||
WormQTL | gene | WBGene00012216 | |||||||
WormFlux | gene | WBGene00012216 | |||||||
NDB | locus_tag | CELE_W02D9.10 | |||||||
NCBI | gene | 173125 | |||||||
RefSeq | protein | NM_060779.6 | |||||||
TREEFAM | TREEFAM_ID | TF318688 | |||||||
TrEMBL | UniProtAcc | Q9XVG7 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVG7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 17 Jun 2022 20:36:35 | WBPerson21950 | Name_change | CGC_name | dpsm-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dpsm | ||||||||
Allele (20) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00009293 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00010223 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalapppaa; anchor cell; arcade cell; head mesodermal cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including cyc-1; hyl-1; and nuo-6 based on microarray; RNA-seq; and tiling array studies. Is affected by nineteen chemicals including Lithium Chloride; rotenone; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W02D9.10 | |||||||
Corresponding_transcript | W02D9.10.1 | ||||||||
Other_sequence | CR11205 | ||||||||
CR11149 | |||||||||
CRC11130_1 | |||||||||
CR11148 | |||||||||
Associated_feature (17) | |||||||||
Experimental_info | RNAi_result | WBRNAi00073309 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036196 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115896 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004379 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054607 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011703 | ||||||||
Expr1035407 | |||||||||
Expr1158151 | |||||||||
Expr2006698 | |||||||||
Expr2024916 | |||||||||
Drives_construct | WBCnstr00030062 | ||||||||
Construct_product | WBCnstr00030062 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (253) | |||||||||
Interaction (54) | |||||||||
Map_info | Positive | Positive_clone | W02D9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 13.5071 | |||||||
Reference | WBPaper00060275 | ||||||||
WBPaper00062579 | |||||||||
WBPaper00065331 | |||||||||
Method | Gene |