WormBase Tree Display for Gene: WBGene00012115
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| WBGene00012115 | SMap | S_parent | Sequence | CHROMOSOME_I | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T28B8.4 | ||||||||
| Molecular_name | T28B8.4 | |||||||||
| T28B8.4.1 | ||||||||||
| CE48017 | ||||||||||
| Other_name | CELE_T28B8.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | T28B8.4 | |||||||||
| DB_info | Database | AceView | gene | 1I743 | ||||||
| WormQTL | gene | WBGene00012115 | ||||||||
| NDB | locus_tag | CELE_T28B8.4 | ||||||||
| Panther | gene | CAEEL|WormBase=WBGene00012115|UniProtKB=K7ZUR1 | ||||||||
| family | PTHR32170 | |||||||||
| NCBI | gene | 13181077 | ||||||||
| RefSeq | protein | NM_001276532.4 | ||||||||
| TrEMBL | UniProtAcc | K7ZUR1 | ||||||||
| UniProt_GCRP | UniProtAcc | K7ZUR1 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 28 Feb 2005 13:31:26 | WBPerson1847 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (86) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00022800 | |||||||||
| 00022801 | ||||||||||
| 00022802 | ||||||||||
| 00022803 | ||||||||||
| 00022804 | ||||||||||
| 00022805 | ||||||||||
| 00022806 | ||||||||||
| 00114063 | ||||||||||
| 00114064 | ||||||||||
| 00114065 | ||||||||||
| Ortholog (30) | ||||||||||
| Paralog | WBGene00007588 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | ||||||||||
| WBGene00012114 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||||
| Inparanoid_8 | ||||||||||
| Panther | ||||||||||
| WormBase-Compara | ||||||||||
| Structured_description | Automated_description | Predicted to enable lysine-acetylated histone binding activity; peptidase activator activity; and proteasome binding activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process. Predicted to be located in cytosol and nucleus. Predicted to be part of proteasome complex. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | |||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | T28B8.4 | ||||||||
| Corresponding_CDS_history | T28B8.4:wp140 | |||||||||
| Corresponding_transcript | T28B8.4.1 | |||||||||
| Corresponding_pseudogene_history | T28B8.4:wp234 | |||||||||
| Other_sequence | Oden_isotig22454 | |||||||||
| Oden_isotig19401 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00004336 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00054385 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00000769 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr2006601 | |||||||||
| Expr2024818 | ||||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (106) | ||||||||||
| Map_info | Positive | Positive_clone | T28B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | I | 2.60987 | ||||||||
| Reference | WBPaper00055090 | |||||||||
| Method | Gene |
