WormBase Tree Display for Gene: WBGene00012077
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| WBGene00012077 | SMap | S_parent | Sequence | T27A8 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | Sequence_name | T27A8.5 | ||||||||
| Molecular_name | T27A8.5 | |||||||||
| Other_name | CELE_T27A8.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | T27A8.5 | |||||||||
| DB_info | Database | AceView | gene | XQ676 | ||||||
| WormQTL | gene | WBGene00012077 | ||||||||
| WormFlux | gene | WBGene00012077 | ||||||||
| NDB | locus_tag | CELE_T27A8.5 | ||||||||
| NCBI | gene | 188970 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 25 Jul 2019 14:30:33 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 25 Jul 2019 14:59:35 | WBPerson4025 | Event | Acquires_merge | WBGene00012076 | |||||
| Acquires_merge | WBGene00012076 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (105) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00216807 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| WBGene00071338 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00061353 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00073245 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00037364 | Caenorhabditis briggsae | From_analysis | OMA | |||||||
| Paralog | WBGene00009951 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015573 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00020793 | Caenorhabditis elegans | From_analysis | Panther | |||||||
| WBGene00016487 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Panther | ||||||||||
| WBGene00020794 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Panther | ||||||||||
| Structured_description | Automated_description | Enriched in AVK based on RNA-seq studies. Is affected by several genes including rsr-2; pri-1; and hpl-2 based on RNA-seq; tiling array; and microarray studies. Is affected by six chemicals including cadmium; Diazinon; and dibromoacetic acid based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | ||||||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | |||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T27A8.5:wp272 | ||||||||
| Corresponding_pseudogene | T27A8.5 | |||||||||
| Other_sequence | FG347590.1 | |||||||||
| JI174117.1 | ||||||||||
| JI468892.1 | ||||||||||
| Experimental_info | Expr_pattern | Expr1014145 | ||||||||
| Expr1021641 | ||||||||||
| Expr1157817 | ||||||||||
| Expr1157818 | ||||||||||
| Expr2006564 | ||||||||||
| Expr2024780 | ||||||||||
| Drives_construct | WBCnstr00030149 | |||||||||
| WBCnstr00030150 | ||||||||||
| Construct_product | WBCnstr00030149 | |||||||||
| WBCnstr00030150 | ||||||||||
| Microarray_results (23) | ||||||||||
| Expression_cluster (39) | ||||||||||
| Interaction (57) | ||||||||||
| Map_info | Positive | Positive_clone | T27A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | X | 23.6885 | ||||||||
| Method | Gene |
