WormBase Tree Display for Gene: WBGene00011796
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WBGene00011796 | SMap | S_parent | Sequence | T16G1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T16G1.2 | |||||||
Molecular_name | T16G1.2a | ||||||||
T16G1.2a.1 | |||||||||
CE20072 | |||||||||
T16G1.2b | |||||||||
CE44167 | |||||||||
T16G1.2b.1 | |||||||||
Other_name | CELE_T16G1.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | T16G1.2 | ||||||||
DB_info | Database | AceView | gene | 5N411 | |||||
WormQTL | gene | WBGene00011796 | |||||||
WormFlux | gene | WBGene00011796 | |||||||
NDB | locus_tag | CELE_T16G1.2 | |||||||
NCBI | gene | 188552 | |||||||
RefSeq | protein | NM_001269539.3 | |||||||
NM_001269540.1 | |||||||||
TREEFAM | TREEFAM_ID | TF350655 | |||||||
TrEMBL | UniProtAcc | Q9XUP9 | |||||||
C9IY39 | |||||||||
UniProt_GCRP | UniProtAcc | Q9XUP9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (58) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (24) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ALA; epithelial cell; hypodermis; mechanosensory neurons; and somatic gonad precursor based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including swsn-1; nuo-6; and atfs-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including 1-methylnicotinamide; D-glucose; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T16G1.2a | |||||||
T16G1.2b | |||||||||
Corresponding_transcript | T16G1.2a.1 | ||||||||
T16G1.2b.1 | |||||||||
Other_sequence | JI173689.1 | ||||||||
Oden_isotig24805 | |||||||||
Dviv_isotig24268 | |||||||||
Associated_feature | WBsf1001670 | ||||||||
WBsf1020628 | |||||||||
WBsf232717 | |||||||||
Experimental_info | RNAi_result | WBRNAi00035610 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018768 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053412 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028456 | ||||||||
Expr1035194 | |||||||||
Expr1156987 | |||||||||
Expr2006208 | |||||||||
Expr2024425 | |||||||||
Drives_construct | WBCnstr00030381 | ||||||||
Construct_product | WBCnstr00030381 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (171) | |||||||||
Interaction (170) | |||||||||
Map_info | Positive | Positive_clone | T16G1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 4.73912 | |||||||
Method | Gene |