WormBase Tree Display for Gene: WBGene00011749
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WBGene00011749 | SMap | S_parent | Sequence | T13F2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ssp-36 | Person_evidence | WBPerson261 | |||||
Sequence_name | T13F2.12 | ||||||||
Molecular_name | T13F2.12 | ||||||||
T13F2.12.1 | |||||||||
CE13640 | |||||||||
Other_name | CELE_T13F2.12 | Accession_evidence | NDB | BX284604 | |||||
Public_name | ssp-36 | ||||||||
DB_info | Database | AceView | gene | 4K528 | |||||
WormQTL | gene | WBGene00011749 | |||||||
WormFlux | gene | WBGene00011749 | |||||||
NDB | locus_tag | CELE_T13F2.12 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011749|UniProtKB=Q94054 | |||||||
family | PTHR22947 | ||||||||
NCBI | gene | 177811 | |||||||
RefSeq | protein | NM_069338.6 | |||||||
TrEMBL | UniProtAcc | Q94054 | |||||||
UniProt_GCRP | UniProtAcc | Q94054 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 10 Nov 2010 15:19:39 | WBPerson2970 | Name_change | CGC_name | ssp-36 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ssp | ||||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (24) | |||||||||
Paralog (33) | |||||||||
Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including numr-2; numr-1; and mut-16 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; D-glucose; and Doxycycline based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MSP (Major sperm protein) domain; PapD-like superfamily; Immunoglobulin-like fold; and Major sperm protein (MSP) domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T13F2.12 | |||||||
Corresponding_transcript | T13F2.12.1 | ||||||||
Other_sequence | FC812527.1 | ||||||||
SRC01129_1 | |||||||||
FC812295.1 | |||||||||
JI215637.1 | |||||||||
FC812767.1 | |||||||||
FC812562.1 | |||||||||
FC818180.1 | |||||||||
AS08411 | |||||||||
FC818219.1 | |||||||||
SR00576 | |||||||||
Associated_feature | WBsf668186 | ||||||||
WBsf997473 | |||||||||
WBsf230616 | |||||||||
Experimental_info | RNAi_result | WBRNAi00053268 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027314 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007375 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025355 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014209 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1156854 | ||||||||
Expr2016938 | |||||||||
Expr2035086 | |||||||||
Drives_construct | WBCnstr00030419 | ||||||||
Construct_product | WBCnstr00030419 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (86) | |||||||||
Interaction (119) | |||||||||
Map_info | Map | IV | Position | 4.4033 | Error | 0.001008 | |||
Positive | Positive_clone | T13F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |