WormBase Tree Display for Gene: WBGene00011730
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| WBGene00011730 | SMap | S_parent | Sequence | T12D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | drr-2 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | T12D8.2 | ||||||||
| Molecular_name | T12D8.2 | ||||||||
| T12D8.2.1 | |||||||||
| CE16399 | |||||||||
| Other_name | CELE_T12D8.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | drr-2 | ||||||||
| DB_info | Database | AceView | gene | 3O734 | |||||
| WormQTL | gene | WBGene00011730 | |||||||
| WormFlux | gene | WBGene00011730 | |||||||
| NDB | locus_tag | CELE_T12D8.2 | |||||||
| NCBI | gene | 259546 | |||||||
| RefSeq | protein | NM_067417.4 | |||||||
| TREEFAM | TREEFAM_ID | TF354331 | |||||||
| TrEMBL | UniProtAcc | O45781 | |||||||
| UniProt_GCRP | UniProtAcc | O45781 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2005 14:07:05 | WBPerson2970 | Name_change | CGC_name | drr-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | drr | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00036332 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036790 | ||||||||
| 00036791 | |||||||||
| 00036792 | |||||||||
| 00036793 | |||||||||
| 00036794 | |||||||||
| 00036795 | |||||||||
| 00036796 | |||||||||
| 00036797 | |||||||||
| 00122937 | |||||||||
| 00122938 | |||||||||
| Contained_in_operon | CEOP3818 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00008688 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00011155 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00011156 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00019157 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable RNA strand annealing activity; RNA strand-exchange activity; and ribosomal small subunit binding activity. Predicted to be involved in eukaryotic translation initiation factor 4F complex assembly and formation of translation preinitiation complex. Part of eukaryotic 48S preinitiation complex. Expressed in several structures, including coelomocyte; excretory canal; neurons; ventral nerve cord; and vulva. Human ortholog(s) of this gene implicated in Williams-Beuren syndrome. Is an ortholog of human EIF4H (eukaryotic translation initiation factor 4H). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1928 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12741) | ||||
| Molecular_info | Corresponding_CDS | T12D8.2 | |||||||
| Corresponding_transcript | T12D8.2.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf651589 | ||||||||
| WBsf981653 | |||||||||
| WBsf227782 | |||||||||
| WBsf227783 | |||||||||
| WBsf227784 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr9027 | ||||||||
| Expr1019228 | |||||||||
| Expr1035156 | |||||||||
| Expr1156792 | |||||||||
| Expr2011096 | |||||||||
| Expr2029332 | |||||||||
| Drives_construct | WBCnstr00007956 | ||||||||
| WBCnstr00007958 | |||||||||
| WBCnstr00007959 | |||||||||
| WBCnstr00013681 | |||||||||
| WBCnstr00030434 | |||||||||
| Construct_product | WBCnstr00007956 | ||||||||
| WBCnstr00007958 | |||||||||
| WBCnstr00007959 | |||||||||
| WBCnstr00013681 | |||||||||
| WBCnstr00030434 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (179) | |||||||||
| Map_info | Map | III | Position | 21.3196 | Error | 0.002695 | |||
| Positive | Positive_clone | T12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026715 | ||||||||
| WBPaper00027281 | |||||||||
| WBPaper00031586 | |||||||||
| WBPaper00032932 | |||||||||
| WBPaper00036246 | |||||||||
| WBPaper00037449 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062599 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
