WormBase Tree Display for Gene: WBGene00011527
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| WBGene00011527 | SMap | S_parent | Sequence | T06D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cchl-1 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | T06D8.6 | ||||||||
| Molecular_name | T06D8.6 | ||||||||
| T06D8.6.1 | |||||||||
| CE02327 | |||||||||
| Other_name | CELE_T06D8.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | cchl-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2005 14:07:05 | WBPerson2970 | Name_change | CGC_name | cchl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cchl | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00047486 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP2524 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Concise_description | cchl-1 encodes a cytochrome C-type heme lyase; by homology, CCHL-1 is predicted to covalently attach heme to cytochrome c; loss of cchl-1 activity results in longer lifespan. | Paper_evidence | WBPaper00026715 | |||||
| WBPaper00005659 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 03 Apr 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable holocytochrome-c synthase activity. Located in mitochondrion. Human ortholog(s) of this gene implicated in linear skin defects with multiple congenital anomalies 1 and microphthalmia. Is an ortholog of human HCCS (holocytochrome c synthase). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10629 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4837) | ||||
| DOID:0111808 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4837) | ||||||
| Molecular_info | Corresponding_CDS | T06D8.6 | |||||||
| Corresponding_transcript | T06D8.6.1 | ||||||||
| Other_sequence (77) | |||||||||
| Associated_feature | WBsf650553 | ||||||||
| WBsf981281 | |||||||||
| WBsf989676 | |||||||||
| WBsf989677 | |||||||||
| WBsf1013191 | |||||||||
| WBsf223907 | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Expr1012822 | ||||||||
| Expr1035079 | |||||||||
| Expr1156251 | |||||||||
| Expr2009761 | |||||||||
| Expr2028001 | |||||||||
| Drives_construct | WBCnstr00030586 | ||||||||
| Construct_product | WBCnstr00030586 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (37) | |||||||||
| Map_info | Map | II | Position | 3.36453 | Error | 0.004905 | |||
| Positive | Positive_clone | T06D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026715 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00044885 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064934 | |||||||||
| WBPaper00066405 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
