WormBase Tree Display for Gene: WBGene00010906
expand all nodes | collapse all nodes | view schema
WBGene00010906 | SMap | S_parent | Sequence | M88 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | M88.3 | |||||||
Molecular_name | M88.3 | ||||||||
M88.3.1 | |||||||||
CE01038 | |||||||||
Other_name | CELE_M88.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | M88.3 | ||||||||
DB_info | Database | AceView | gene | 3F632 | |||||
WormQTL | gene | WBGene00010906 | |||||||
WormFlux | gene | WBGene00010906 | |||||||
NDB | locus_tag | CELE_M88.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010906|UniProtKB=Q21600 | |||||||
family | PTHR31430 | ||||||||
NCBI | gene | 187471 | |||||||
RefSeq | protein | NM_065520.2 | |||||||
TREEFAM | TREEFAM_ID | TF317842 | |||||||
TrEMBL | UniProtAcc | Q21600 | |||||||
UniProt_GCRP | UniProtAcc | Q21600 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (23) | |||||||||
Strain | WBStrain00002149 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (30) | |||||||||
Paralog | WBGene00007209 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00009502 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00014641 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
WBGene00017833 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016040 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011129 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020400 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00044979 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012120 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011297 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including ciliated neurons; germ line; interfacial epithelial cell; pharyngeal cell; and rect_D based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including mut-16; nuo-6; and atfs-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; allantoin; and Sirolimus based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | M88.3 | |||||||
Corresponding_transcript | M88.3.1 | ||||||||
Other_sequence | CJC11760_1 | ||||||||
Associated_feature | WBsf226544 | ||||||||
Experimental_info | RNAi_result | WBRNAi00005254 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00103466 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017281 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094774 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034499 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051072 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram316 | ||||||||
Expr6437 | |||||||||
Expr1022455 | |||||||||
Expr1034786 | |||||||||
Expr1154774 | |||||||||
Expr2005293 | |||||||||
Expr2023513 | |||||||||
Drives_construct | WBCnstr00002908 | ||||||||
WBCnstr00031063 | |||||||||
Construct_product | WBCnstr00031063 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (123) | |||||||||
Interaction | WBInteraction000503226 | ||||||||
Map_info | Positive | Positive_clone | M88 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -3.11801 | |||||||
Reference | WBPaper00027315 | ||||||||
WBPaper00064325 | |||||||||
Method | Gene |