WormBase Tree Display for Gene: WBGene00010663
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| WBGene00010663 | SMap | S_parent | Sequence | K08E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | toca-2 | Person_evidence | WBPerson5000 | |||||
| WBPerson5001 | |||||||||
| Sequence_name | K08E3.3 | ||||||||
| Molecular_name | K08E3.3a | ||||||||
| K08E3.3a.1 | |||||||||
| CE37123 | |||||||||
| K08E3.3b | |||||||||
| CE37124 | |||||||||
| K08E3.3b.1 | |||||||||
| Other_name | CELE_K08E3.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | toca-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2004 11:40:09 | WBPerson1983 | Event | Split_into | WBGene00023451 | ||||
| 3 | 31 May 2006 17:04:33 | WBPerson2970 | Name_change | CGC_name | toca-2 | ||||
| Split_into | WBGene00023451 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | toca | ||||||||
| Allele (53) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (28) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00017298 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Involved in several processes, including negative regulation of protein localization to adherens junction; positive regulation of egg-laying behavior; and regulation of cellular component organization. Located in several cellular components, including cell-cell junction; intracellular vesicle; and plasma membrane. Expressed in spermatheca and uterus. Human ortholog(s) of this gene implicated in Huntington's disease. Is an ortholog of human FNBP1 (formin binding protein 1); FNBP1L (formin binding protein 1 like); and TRIP10 (thyroid hormone receptor interactor 10). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:12858 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12304) | ||||
| Molecular_info | Corresponding_CDS | K08E3.3a | |||||||
| K08E3.3b | |||||||||
| Corresponding_CDS_history | K08E3.3a:wp129 | ||||||||
| K08E3.3b:wp129 | |||||||||
| Corresponding_transcript | K08E3.3a.1 | ||||||||
| K08E3.3b.1 | |||||||||
| Other_sequence | CRC06437_1 | ||||||||
| DI02200 | |||||||||
| HBC16197_1 | |||||||||
| DIC01573_1 | |||||||||
| CR07394 | |||||||||
| EX014135.1 | |||||||||
| Associated_feature | WBsf645733 | ||||||||
| WBsf659780 | |||||||||
| WBsf995013 | |||||||||
| WBsf226063 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016806 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050283 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006275 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2133 | ||||||||
| Expr8794 | |||||||||
| Expr8796 | |||||||||
| Expr12308 | |||||||||
| Expr1024110 | |||||||||
| Expr1034661 | |||||||||
| Expr1153985 | |||||||||
| Expr2017440 | |||||||||
| Expr2035579 | |||||||||
| Drives_construct | WBCnstr00031243 | ||||||||
| Construct_product | WBCnstr00013530 | ||||||||
| WBCnstr00020634 | |||||||||
| WBCnstr00031243 | |||||||||
| Antibody | WBAntibody00001521 | ||||||||
| WBAntibody00001983 | |||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | III | Position | 21.4902 | Error | 0.008637 | |||
| Positive | Positive_clone | K08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006090 | ||||||||
| WBPaper00035252 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039213 | |||||||||
| WBPaper00043728 | |||||||||
| WBPaper00046549 | |||||||||
| WBPaper00048254 | |||||||||
| WBPaper00048842 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
