WormBase Tree Display for Gene: WBGene00010293

WBGene00010293 SMap: S_parent: Sequence: F59A1
  Identity: Version: 2
    Name: CGC_name: fbxa-108 Person_evidence: WBPerson655
      Sequence_name: F59A1.7
      Molecular_name: F59A1.7
        F59A1.7.1
        CE39259
        F59A1.7.2
      Other_name: CELE_F59A1.7 Accession_evidence: NDB BX284605
      Public_name: fbxa-108
    DB_info: Database: AceView gene 5S136
        WormQTL gene WBGene00010293
        WormFlux gene WBGene00010293
        NDB locus_tag CELE_F59A1.7
        Panther gene CAEEL|WormBase=WBGene00010293|UniProtKB=Q9XUW2
          family PTHR23015
        NCBI gene 186560
        RefSeq protein NM_075067.5
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9XUW2
        UniProt_GCRP UniProtAcc Q9XUW2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-108
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (150)
    RNASeq_FPKM (74)
    Ortholog (23)
    Paralog (223)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABprpapppa; germ line; head mesodermal cell; neurons; and rect_D based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including fzo-1; atfs-1; and etr-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including manganese chloride; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; F-box A protein FB224; F-box domain; FTH domain; and Domain of unknown function DUF38/FTH, Caenorhabditis species. Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: F59A1.7
    Corresponding_CDS_history: F59A1.7:wp150
    Corresponding_transcript: F59A1.7.1
      F59A1.7.2
    Associated_feature: WBsf982068
  Experimental_info: RNAi_result: WBRNAi00007711 Inferred_automatically: RNAi_primary
      WBRNAi00016042 Inferred_automatically: RNAi_primary
      WBRNAi00077849 Inferred_automatically: RNAi_primary
      WBRNAi00049090 Inferred_automatically: RNAi_primary
      WBRNAi00082480 Inferred_automatically: RNAi_primary
      WBRNAi00082623 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015042
      Expr1152833
      Expr2011455
      Expr2029693
    Drives_construct: WBCnstr00031521
    Construct_product: WBCnstr00031521
    Microarray_results (12)
    Expression_cluster (139)
    Interaction (74)
  Map_info: Map: V Position: 12.9581 Error: 0.004258
    Positive: Positive_clone: F59A1 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5656
        4301
        5388
    Pseudo_map_position
  Reference: WBPaper00012854
    WBPaper00066610
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene