WormBase Tree Display for Gene: WBGene00010140
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| WBGene00010140 | SMap | S_parent | Sequence | F56A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F56A8.4 | |||||||
| Molecular_name | F56A8.4 | ||||||||
| F56A8.4.1 | |||||||||
| CE42906 | |||||||||
| Other_name | CELE_F56A8.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F56A8.4 | ||||||||
| DB_info | Database | AceView | gene | 3O353 | |||||
| WormQTL | gene | WBGene00010140 | |||||||
| WormFlux | gene | WBGene00010140 | |||||||
| NDB | locus_tag | CELE_F56A8.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010140|UniProtKB=O45575 | |||||||
| family | PTHR21503 | ||||||||
| NCBI | gene | 176741 | |||||||
| RefSeq | protein | NM_067331.6 | |||||||
| TREEFAM | TREEFAM_ID | TF319645 | |||||||
| TrEMBL | UniProtAcc | O45575 | |||||||
| UniProt_GCRP | UniProtAcc | O45575 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3772 | ||||||||
| Ortholog | WBGene00081220 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| WBGene00147669 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00152591 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| Sp34_30015700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g9308 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (57) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaaaa; AFD; body wall musculature; and germ line based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including cua-1; atfs-1; and isp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including manganese chloride; stavudine; and antimycin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56A8.4 | |||||||
| Corresponding_CDS_history | F56A8.4:wp193 | ||||||||
| Corresponding_transcript | F56A8.4.1 | ||||||||
| Associated_feature | WBsf994845 | ||||||||
| WBsf1016349 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006117 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048621 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015775 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018218 | ||||||||
| Expr1034431 | |||||||||
| Expr1152389 | |||||||||
| Expr2004267 | |||||||||
| Expr2022489 | |||||||||
| Drives_construct | WBCnstr00031635 | ||||||||
| Construct_product | WBCnstr00031635 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (59) | |||||||||
| Map_info | Positive | Positive_clone | F56A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 21.1598 | |||||||
| Method | Gene |
