WormBase Tree Display for Gene: WBGene00010101
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WBGene00010101 | SMap | S_parent | Sequence | F55C9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxb-57 | Person_evidence | WBPerson655 | |||||
Sequence_name | F55C9.4 | ||||||||
Molecular_name | F55C9.4 | ||||||||
F55C9.4.1 | |||||||||
CE18736 | |||||||||
Other_name | CELE_F55C9.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | fbxb-57 | ||||||||
DB_info | Database | AceView | gene | 5T763 | |||||
WormQTL | gene | WBGene00010101 | |||||||
WormFlux | gene | WBGene00010101 | |||||||
NDB | locus_tag | CELE_F55C9.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010101|UniProtKB=Q9XUZ4 | |||||||
family | PTHR22899 | ||||||||
NCBI | gene | 186292 | |||||||
RefSeq | protein | NM_075352.3 | |||||||
TrEMBL | UniProtAcc | Q9XUZ4 | |||||||
UniProt_GCRP | UniProtAcc | Q9XUZ4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-57 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxb | ||||||||
Allele (46) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | chrV_pilon.g17855 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog (143) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in ABplpapapa; ABprpapapa; G2; and W cell based on single-cell RNA-seq studies. Is affected by several genes including rsr-2; ash-2; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by thirteen chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated; F-box associated domain, type 2; and F-box domain. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F55C9.4 | |||||||
Corresponding_transcript | F55C9.4.1 | ||||||||
Associated_feature | WBsf647706 | ||||||||
WBsf1003203 | |||||||||
WBsf1003204 | |||||||||
WBsf1021710 | |||||||||
WBsf1021711 | |||||||||
Experimental_info | RNAi_result | WBRNAi00032873 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015718 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048485 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027623 | ||||||||
Expr1034412 | |||||||||
Expr1152277 | |||||||||
Expr2011658 | |||||||||
Expr2029897 | |||||||||
Drives_construct | WBCnstr00031667 | ||||||||
Construct_product | WBCnstr00031667 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (107) | |||||||||
Interaction (214) | |||||||||
Map_info | Map | V | Position | 20.8981 | Error | 0.017067 | |||
Positive | Positive_clone | F55C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |