WormBase Tree Display for Gene: WBGene00010077
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| WBGene00010077 | SMap | S_parent | Sequence | F55A11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | Sequence_name | F55A11.4 | ||||||||
| Molecular_name | F55A11.4a | |||||||||
| F55A11.4a.1 | ||||||||||
| CE44090 | ||||||||||
| F55A11.4a.2 | ||||||||||
| F55A11.4a.3 | ||||||||||
| F55A11.4b | ||||||||||
| Other_name | CELE_F55A11.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | F55A11.4 | |||||||||
| DB_info | Database | AceView | gene | 5M253 | ||||||
| WormQTL | gene | WBGene00010077 | ||||||||
| WormFlux | gene | WBGene00010077 | ||||||||
| NDB | locus_tag | CELE_F55A11.4 | ||||||||
| Panther | gene | CAEEL|Gene=F55A11.4|UniProtKB=Q20799 | ||||||||
| family | PTHR24089 | |||||||||
| NCBI | gene | 186276 | ||||||||
| RefSeq | protein | NR_069619.1 | ||||||||
| NM_001269436.4 | ||||||||||
| TREEFAM | TREEFAM_ID | TF313492 | ||||||||
| TrEMBL | UniProtAcc | C8JQR9 | ||||||||
| RNAcentral | URSid | URS00005CF166 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 16 Jan 2006 09:43:14 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 04 Aug 2009 16:59:18 | WBPerson1983 | Event | Changed_class | Pseudogene | CDS | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (44) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00007471 | |||||||||
| 00007472 | ||||||||||
| 00007473 | ||||||||||
| 00007474 | ||||||||||
| 00007475 | ||||||||||
| 00121546 | ||||||||||
| 00121547 | ||||||||||
| 00121548 | ||||||||||
| Contained_in_operon | CEOP5300 | |||||||||
| Ortholog (32) | ||||||||||
| Paralog (35) | ||||||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in transmembrane transport. Predicted to be located in mitochondrial inner membrane. Is an ortholog of human SLC25A25 (solute carrier family 25 member 25). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | ||||||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | |||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | F55A11.4a | ||||||||
| Corresponding_CDS_history | F55A11.4:wp153 | |||||||||
| Corresponding_transcript | F55A11.4b | |||||||||
| F55A11.4a.1 | ||||||||||
| F55A11.4a.2 | ||||||||||
| F55A11.4a.3 | ||||||||||
| Corresponding_pseudogene_history | F55A11.4:wp206 | |||||||||
| Other_sequence | CR10548 | |||||||||
| CBC01397_1 | ||||||||||
| BXC03907_1 | ||||||||||
| CRC05942_1 | ||||||||||
| MCC00336_1 | ||||||||||
| MC00167 | ||||||||||
| MI05765 | ||||||||||
| Tcir_isotig07990 | ||||||||||
| XI02510 | ||||||||||
| XIC03106_1 | ||||||||||
| Associated_feature | WBsf661773 | |||||||||
| WBsf661774 | ||||||||||
| WBsf661775 | ||||||||||
| WBsf1001438 | ||||||||||
| WBsf1001439 | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00048410 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00075881 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00015677 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00008147 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr1034397 | |||||||||
| Expr1152199 | ||||||||||
| Expr2004193 | ||||||||||
| Expr2022413 | ||||||||||
| Microarray_results | SMD_F55A11.4 | |||||||||
| 191486_at | ||||||||||
| A_12_P111061 | ||||||||||
| Aff_F55A11.4 | ||||||||||
| GPL19516_CGZ0023971 | ||||||||||
| GPL19516_CGZ0023972 | ||||||||||
| GPL21109_F55A11.4a | ||||||||||
| GPL3518_CE05946 | ||||||||||
| GPL9450_F55A11.4 | ||||||||||
| cea2.p.118740 | ||||||||||
| Expression_cluster (105) | ||||||||||
| Interaction | WBInteraction000008125 | |||||||||
| WBInteraction000008126 | ||||||||||
| WBInteraction000008127 | ||||||||||
| WBInteraction000008128 | ||||||||||
| Map_info | Positive | Positive_clone | F55A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | 3.35783 | ||||||||
| Reference | WBPaper00055090 | |||||||||
| WBPaper00066805 | ||||||||||
| Method | Gene |
