WormBase Tree Display for Gene: WBGene00009966
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| WBGene00009966 | SMap | S_parent | Sequence | F53B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | isy-1 | |||||||
| Sequence_name | F53B7.3 | ||||||||
| Molecular_name | F53B7.3 | ||||||||
| F53B7.3.1 | |||||||||
| CE05922 | |||||||||
| Other_name | CELE_F53B7.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | isy-1 | ||||||||
| DB_info | Database | AceView | gene | 5L480 | |||||
| WormQTL | gene | WBGene00009966 | |||||||
| WormFlux | gene | WBGene00009966 | |||||||
| NDB | locus_tag | CELE_F53B7.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009966|UniProtKB=Q20716 | |||||||
| family | PTHR13021 | ||||||||
| NCBI | gene | 179524 | |||||||
| RefSeq | protein | NM_073402.7 | |||||||
| SwissProt | UniProtAcc | Q20716 | |||||||
| TREEFAM | TREEFAM_ID | TF105841 | |||||||
| UniProt_GCRP | UniProtAcc | Q20716 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 Apr 2017 11:17:23 | WBPerson2970 | Name_change | CGC_name | isy-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | isy | ||||||||
| Allele (22) | |||||||||
| Strain (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Involved in regulation of primary miRNA processing. Located in nucleus. Expressed in several structures, including hypodermis and neurons. Is an ortholog of human ISY1 (ISY1 splicing factor homolog) and ISY1-RAB43 (ISY1-RAB43 readthrough). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Modifies_disease | DOID:0110403 | ||||||||
| Modifies_disease_in_annotation | WBDOannot00001210 | ||||||||
| Molecular_info | Corresponding_CDS | F53B7.3 | |||||||
| Corresponding_transcript | F53B7.3.1 | ||||||||
| Other_sequence (68) | |||||||||
| Associated_feature | WBsf653053 | ||||||||
| WBsf234479 | |||||||||
| WBsf234480 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr13757 | ||||||||
| Expr1022602 | |||||||||
| Expr1034341 | |||||||||
| Expr1151906 | |||||||||
| Expr2012874 | |||||||||
| Expr2031108 | |||||||||
| Drives_construct | WBCnstr00031779 | ||||||||
| Construct_product | WBCnstr00031779 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction (49) | |||||||||
| Map_info | Map | V | Position | 2.88233 | |||||
| Positive | Positive_clone | F53B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00045396 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00054192 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059062 | |||||||||
| WBPaper00061133 | |||||||||
| WBPaper00065012 | |||||||||
| WBPaper00066607 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
