WormBase Tree Display for Gene: WBGene00009705
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WBGene00009705 | SMap | S_parent | Sequence | F44F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F44F4.10 | |||||||
Molecular_name | F44F4.10 | ||||||||
F44F4.10.1 | |||||||||
CE00997 | |||||||||
Other_name | CELE_F44F4.10 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F44F4.10 | ||||||||
DB_info | Database | AceView | gene | 2L206 | |||||
WormQTL | gene | WBGene00009705 | |||||||
WormFlux | gene | WBGene00009705 | |||||||
NDB | locus_tag | CELE_F44F4.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009705|UniProtKB=Q20408 | |||||||
family | PTHR31128 | ||||||||
NCBI | gene | 185752 | |||||||
RefSeq | protein | NM_063949.2 | |||||||
TREEFAM | TREEFAM_ID | TF315835 | |||||||
TrEMBL | UniProtAcc | Q20408 | |||||||
UniProt_GCRP | UniProtAcc | Q20408 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (31) | |||||||||
Paralog | WBGene00009321 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00009643 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00044684 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00013590 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015034 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020377 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00015820 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | F44F4.1 encodes a nematode-specific sperm protein probably required for a normally high ovulation rate; F44F4.1 has no obvious non-nematode homologs, but does have a putative central coiled-coil domain, and is is paralogous to four other C. elegans proteins (B0207.11, F42G4.6, T08G11.2, and Y81G3A.1); F44F4.1(tm332) hermaphrodites show abnormal egg-laying, retaining significantly fewer eggs than wild-type (perhaps due to a lowered ovulation rate) while retaining late-stage embryos; F44F4.1 has no obvious phenotype in mass RNAi experiments, possibly because of genetic redundancy with its paralogs; F44F4.1 expression is enriched in spermatogenesis. | Paper_evidence | WBPaper00006390 | |||||
WBPaper00029335 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 23 Jul 2007 00:00:00 | ||||||||
Automated_description | Enriched in PVQL; germ line; and in male based on proteomic; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including swsn-1; nuo-6; and atfs-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F44F4.10 | |||||||
Corresponding_transcript | F44F4.10.1 | ||||||||
Other_sequence | CJC02469_1 | ||||||||
Associated_feature | WBsf223859 | ||||||||
Experimental_info | RNAi_result | WBRNAi00047316 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047121 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032256 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014952 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023769 | ||||||||
Expr1034245 | |||||||||
Expr1151168 | |||||||||
Expr2021949 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (127) | |||||||||
Interaction (186) | |||||||||
Map_info | Positive | Positive_clone | F44F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 3.13303 | |||||||
Reference | WBPaper00029335 | ||||||||
Method | Gene |