WormBase Tree Display for Gene: WBGene00009681
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| WBGene00009681 | SMap | S_parent | Sequence | F44D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gipc-2 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F44D12.4 | ||||||||
| Molecular_name | F44D12.4 | ||||||||
| F44D12.4.1 | |||||||||
| CE32187 | |||||||||
| Other_name | CELE_F44D12.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gipc-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Feb 2012 16:30:56 | WBPerson2970 | Name_change | CGC_name | gipc-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gipc | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00031849 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00016440 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Expressed in spermatid. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 15 and oculopharyngodistal myopathy 2. Is an ortholog of human GIPC1 (GIPC PDZ domain containing family member 1) and GIPC3 (GIPC PDZ domain containing family member 3). Human GIPC1 enables signaling receptor binding activity. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110470 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18183) | ||||
| DOID:0081298 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1226) | ||||||
| Molecular_info | Corresponding_CDS | F44D12.4 | |||||||
| Corresponding_CDS_history | F44D12.4:wp88 | ||||||||
| Corresponding_transcript | F44D12.4.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf230653 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00022537 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000250 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032237 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014927 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047277 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram206 | ||||||||
| Expr6070 | |||||||||
| Expr15152 | |||||||||
| Expr1151133 | |||||||||
| Expr2012041 | |||||||||
| Expr2030277 | |||||||||
| Drives_construct | WBCnstr00002725 | ||||||||
| WBCnstr00031997 | |||||||||
| Construct_product | WBCnstr00031997 | ||||||||
| Antibody | WBAntibody00002867 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (310) | |||||||||
| Interaction (229) | |||||||||
| Map_info | Map | IV | Position | 4.46701 | |||||
| Positive | Positive_clone | F44D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056589 | |||||||||
| WBPaper00060732 | |||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
